convert ccf display from itkwidgets to javascript widgets #139
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| name: test-env | |
| on: | |
| push: | |
| branches: [ "main", "dev" ] | |
| pull_request: | |
| branches: [ "main", "dev" ] | |
| workflow_dispatch: | |
| jobs: | |
| test-env: | |
| runs-on: | |
| group: LargerInstance | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.11', '3.12', '3.13'] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| fetch-tags: true | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install system build tools | |
| run: | | |
| if command -v sudo >/dev/null 2>&1; then | |
| sudo apt-get update | |
| sudo apt-get install -y g++ | |
| else | |
| apt-get update | |
| apt-get install -y g++ | |
| fi | |
| - name: Create isolated virtual environment | |
| run: | | |
| python -m venv .venv | |
| echo "$GITHUB_WORKSPACE/.venv/bin" >> $GITHUB_PATH | |
| - name: Install environment from repo files (pip-only) | |
| # requirements-ci.txt is generated by: | |
| # uv export --frozen --extra dev --no-hashes --no-editable --no-emit-project -o requirements-ci.txt | |
| # Re-run that command after any change to pyproject.toml / uv.lock. | |
| run: | | |
| python -m pip install --upgrade pip setuptools wheel | |
| python -m pip install -r requirements-ci.txt | |
| python -m pip install -e . --no-deps | |
| python -m pip install -U mystmd | |
| - name: Environment smoke test (fail fast) | |
| run: | | |
| python -m pip check | |
| python -c " | |
| import importlib | |
| import pkgutil | |
| # Test core dependencies | |
| for mod in ['numpy', 'pandas', 'scipy', 'pynwb', 'nway']: | |
| importlib.import_module(mod) | |
| # Test all databook_utils submodules | |
| import databook_utils | |
| for mod in pkgutil.walk_packages(databook_utils.__path__, databook_utils.__name__ + '.'): | |
| importlib.import_module(mod.name) | |
| print('✓ Environment smoke test passed') | |
| " | |
| - name: Build documentation | |
| run: | | |
| myst clean --all | |
| myst build --html | |
| - name: Print environment snapshot | |
| run: python -m pip freeze |