build: aind-nwb-utils 0.2.6

Author: alejoe91

pipeline/main.nf

@@ -1,5 +1,5 @@
 #!/usr/bin/env nextflow
-// hash:sha256:ee98b4e65b01a67b4d88307345db45f4e6e8fb4cf31a1015040cf7acaa65e5dd
+// hash:sha256:4e34a92305258e695c01ae2f81fb19b2ea936116870217bf2899b64c425f67e7
 
 // capsule - Job Dispatch Ecephys
 process capsule_aind_ephys_job_dispatch_4 {
@@ -106,7 +106,7 @@ process capsule_aind_ephys_preprocessing_1 {
 // capsule - NWB Packaging Ecephys
 process capsule_nwb_packaging_ecephys_capsule_12 {
 	tag 'capsule-3438484'
-	container "$REGISTRY_HOST/published/b16dfc92-eab4-425d-978f-0ba61632c413:v13"
+	container "$REGISTRY_HOST/published/b16dfc92-eab4-425d-978f-0ba61632c413:v14"
 
 	cpus 8
 	memory '60 GB'
@@ -134,9 +134,9 @@ process capsule_nwb_packaging_ecephys_capsule_12 {
 
 	echo "[${task.tag}] cloning git repo..."
 	if [[ "\$(printf '%s\n' "2.20.0" "\$(git version | awk '{print \$3}')" | sort -V | head -n1)" = "2.20.0" ]]; then
-		git -c credential.helper= clone --filter=tree:0 --branch v13.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-3438484.git" capsule-repo
+		git -c credential.helper= clone --filter=tree:0 --branch v14.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-3438484.git" capsule-repo
 	else
-		git -c credential.helper= clone --branch v13.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-3438484.git" capsule-repo
+		git -c credential.helper= clone --branch v14.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-3438484.git" capsule-repo
 	fi
 	mv capsule-repo/code capsule/code && ln -s \$PWD/capsule/code /code
 	rm -rf capsule-repo
@@ -408,7 +408,7 @@ process capsule_aind_ephys_results_collector_9 {
 // capsule - NWB Packaging Units
 process capsule_nwb_packaging_units_11 {
 	tag 'capsule-5841110'
-	container "$REGISTRY_HOST/published/b9333ffe-ae7c-4b67-882f-ea71054889dd:v15"
+	container "$REGISTRY_HOST/published/b9333ffe-ae7c-4b67-882f-ea71054889dd:v16"
 
 	cpus 4
 	memory '30 GB'
@@ -440,9 +440,9 @@ process capsule_nwb_packaging_units_11 {
 
 	echo "[${task.tag}] cloning git repo..."
 	if [[ "\$(printf '%s\n' "2.20.0" "\$(git version | awk '{print \$3}')" | sort -V | head -n1)" = "2.20.0" ]]; then
-		git -c credential.helper= clone --filter=tree:0 --branch v15.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-5841110.git" capsule-repo
+		git -c credential.helper= clone --filter=tree:0 --branch v16.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-5841110.git" capsule-repo
 	else
-		git -c credential.helper= clone --branch v15.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-5841110.git" capsule-repo
+		git -c credential.helper= clone --branch v16.0 "https://\$GIT_ACCESS_TOKEN@\$GIT_HOST/capsule-5841110.git" capsule-repo
 	fi
 	mv capsule-repo/code capsule/code && ln -s \$PWD/capsule/code /code
 	rm -rf capsule-repo