@@ -65,19 +65,40 @@ async def get_access_token(settings: Settings) -> str:
6565 response_model = List [PrepLotData ],
6666)
6767async def get_viral_prep_lots (
68- lot : str = Path (..., examples = ["VT3214g" ]),
68+ lot : str = Path (
69+ ...,
70+ openapi_examples = {
71+ "default" : {
72+ "summary" : "A sample prep lot ID" ,
73+ "description" : "Example prep lot ID for TARS" ,
74+ "value" : "VT3214g"
75+ }
76+ }
77+ ),
6978 page_size : int = Query (
7079 1 ,
7180 le = 50 ,
7281 alias = "page_size" ,
7382 description = "Number of items to return in a single page." ,
74- examples = [1 ],
83+ openapi_examples = {
84+ "default" : {
85+ "summary" : "A sample page size" ,
86+ "description" : "Example page size for TARS" ,
87+ "value" : 1
88+ }
89+ }
7590 ),
7691 limit : int = Query (
7792 1 ,
7893 alias = "limit" ,
7994 description = "Limit number of items returned. Set to 0 to return all." ,
80- examples = [1 ],
95+ openapi_examples = {
96+ "default" : {
97+ "summary" : "A sample limit" ,
98+ "description" : "Example limit for TARS" ,
99+ "value" : 1
100+ }
101+ }
81102 ),
82103 settings : Settings = Depends (get_settings ),
83104):
@@ -113,19 +134,41 @@ async def get_viral_prep_lots(
113134 response_model = List [MoleculeData ],
114135)
115136async def get_molecules (
116- name : str = Path (..., examples = ["AiP20611" ]),
137+ name : str = Path
138+ (
139+ ...,
140+ openapi_examples = {
141+ "default" : {
142+ "summary" : "A sample molecule name" ,
143+ "description" : "Example molecule name for TARS" ,
144+ "value" : "AiP20611"
145+ }
146+ }
147+ ),
117148 page_size : int = Query (
118149 1 ,
119150 le = 50 ,
120151 alias = "page_size" ,
121152 description = "Number of items to return in a single page." ,
122- examples = [1 ],
153+ openapi_examples = {
154+ "default" : {
155+ "summary" : "A sample page size" ,
156+ "description" : "Example page size for TARS" ,
157+ "value" : 1
158+ }
159+ },
123160 ),
124161 limit : int = Query (
125162 1 ,
126163 alias = "limit" ,
127164 description = "Limit number of items returned. Set to 0 to return all." ,
128- examples = [1 ],
165+ openapi_examples = {
166+ "default" : {
167+ "summary" : "A sample limit" ,
168+ "description" : "Example limit for TARS" ,
169+ "value" : 1
170+ }
171+ },
129172 ),
130173 settings : Settings = Depends (get_settings ),
131174):
@@ -160,32 +203,53 @@ async def get_molecules(
160203 response_model = List [VirusData ],
161204)
162205async def get_viruses (
163- name : str = Path (..., examples = ["VIR300002_PHPeB" ]),
206+ name : str = Path (
207+ ...,
208+ openapi_examples = {
209+ "default" : {
210+ "summary" : "A sample virus name" ,
211+ "description" : "Example virus name for TARS" ,
212+ "value" : "VIR300002_PHPeB"
213+ }
214+ }
215+ ),
164216 page_size : int = Query (
165217 1 ,
166218 le = 50 ,
167219 alias = "page_size" ,
168220 description = "Number of items to return in a single page." ,
169- examples = [1 ],
221+ openapi_examples = {
222+ "default" : {
223+ "summary" : "A sample page size" ,
224+ "description" : "Example page size for TARS" ,
225+ "value" : 1
226+ }
227+ },
170228 ),
171229 limit : int = Query (
172230 1 ,
173231 alias = "limit" ,
174232 description = "Limit number of items returned. Set to 0 to return all." ,
175- examples = [1 ],
233+ openapi_examples = {
234+ "default" : {
235+ "summary" : "A sample limit" ,
236+ "description" : "Example limit for TARS" ,
237+ "value" : 1
238+ }
239+ },
176240 ),
177241 settings : Settings = Depends (get_settings ),
178242):
179243 """
180- ## TARS Endpoint to molecule data.
244+ ## TARS Endpoint to virus data.
181245 """
182246 bearer_token = await get_access_token (settings = settings )
183247 headers = {
184248 "Authorization" : f"Bearer { bearer_token } " ,
185249 "Content-Type" : "application/json" ,
186250 }
187251 query_params = {
188- "page_size " : str (page_size ),
252+ "pageSize " : str (page_size ), # Also fixed this - should be "pageSize" not "page_size"
189253 "order" : "1" ,
190254 "orderBy" : "id" ,
191255 "searchFields" : "aliases.name" ,
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