v0.3.2

What's Changed

• major code changes and logical improvements in analysis steps in #61

Full Changelog: v0.3.1...v0.3.2

v0.3.1

What's Changed

• add trim_first_g option for fastq2count task
  • for more info about this logic, see Fig 2 here
• minor code and document improvements in #59

Full Changelog: v0.3.0...v0.3.1

v0.3.0

What's Changed

• improve docs and add example codes for fastq2count tasks
• bug fixes and code improvements in #58

Full Changelog: v0.2.13...v0.3.0

v0.2.13

What's Changed

• minor improvements
  • change code organization in #57
  • close #14
  • add methods to collect score tables

Full Changelog: v0.2.12...v0.2.13

v0.2.12

What's Changed

• minor changes in docs
• fix a bug in fastq2count in #55

Full Changelog: v0.2.11...v0.2.12

v0.2.11

What's Changed

• introduce counter module, see #42
• clarify references to elements in sgRNA library in #48
• improve core functionalities for CLI in #53

Full Changelog: v0.2.10...v0.2.11

v0.2.10

What's Changed

• major reformatting and introduce alpha version of CLI in #44
• update plotReplicateScatter function in #46

Full Changelog: v0.2.9...v0.2.10

v0.2.9

What's Changed

• support cas12-screens – #40, #39
• improve ngs module
  • enable processing fastq files from single, dual, or multiplexed Cas9 and Cas12 screens
  • introduce cas9 and cas12 submodules

Full Changelog: v0.2.8...v0.2.9

v0.2.8

What's Changed

• Improve NGS module #38
• Support both single-guide and dual-guide library design #37
  (i.e. V2 and V3 genome-scale dCas9 screen platforms)
• Write and improve test modules
• Improve doc and license files

Full Changelog: v0.2.7...v0.2.8

v0.2.7

• introduce ngs module to process fastq files and generate count matrix
• add missing features to support single-guide-design screens (i.e. V2 CRISPRi/a screens)