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1 | 1 | # Changelog |
2 | 2 |
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| 3 | +## [2.0.0](https://github.com/BfArM-MVH/grz-tools/compare/grzctl-v1.4.0...grzctl-v2.0.0) (2026-04-27) |
| 4 | + |
| 5 | + |
| 6 | +### ⚠ BREAKING CHANGES |
| 7 | + |
| 8 | +* **grzctl:** Automatically update submission state upon subcommand invocation ([#501](https://github.com/BfArM-MVH/grz-tools/issues/501)) |
| 9 | + |
| 10 | +### Features |
| 11 | + |
| 12 | +* **grz-db,grzctl:** add selected_for_qc submission column to submission database ([#531](https://github.com/BfArM-MVH/grz-tools/issues/531)) ([a753bd2](https://github.com/BfArM-MVH/grz-tools/commit/a753bd2f44a73fc113e10a736dd8c09f7c035b07)) |
| 13 | +* **grz-pydantic-models:** Enforce differring checksums for sequencing data ([#496](https://github.com/BfArM-MVH/grz-tools/issues/496)) ([2fc80db](https://github.com/BfArM-MVH/grz-tools/commit/2fc80db0dea956d8f820ce8f8212b6b402fd53ca)), closes [#430](https://github.com/BfArM-MVH/grz-tools/issues/430) |
| 14 | +* **grzctl,grz-cli,grz-common:** Merge multiple configuration files ([#490](https://github.com/BfArM-MVH/grz-tools/issues/490)) ([8ae881d](https://github.com/BfArM-MVH/grz-tools/commit/8ae881d4f65882ae5d8823bdb00971eec246a395)) |
| 15 | +* **grzctl:** add --json output to db submission show ([69c398d](https://github.com/BfArM-MVH/grz-tools/commit/69c398db8591e6cf48fd0d3f2c2f288a03c6203a)), closes [#503](https://github.com/BfArM-MVH/grz-tools/issues/503) |
| 16 | +* **grzctl:** Add --json output to grzctl db submission show ([#510](https://github.com/BfArM-MVH/grz-tools/issues/510)) ([69c398d](https://github.com/BfArM-MVH/grz-tools/commit/69c398db8591e6cf48fd0d3f2c2f288a03c6203a)) |
| 17 | +* **grzctl:** add state-based filtering to grzctl db list (latest by default) ([#523](https://github.com/BfArM-MVH/grz-tools/issues/523)) ([9a715f4](https://github.com/BfArM-MVH/grz-tools/commit/9a715f40ec80d149fe5ab2fbda383da9671ff332)), closes [#504](https://github.com/BfArM-MVH/grz-tools/issues/504) |
| 18 | +* **grzctl:** Automatically update submission state upon subcommand invocation ([#501](https://github.com/BfArM-MVH/grz-tools/issues/501)) ([8953102](https://github.com/BfArM-MVH/grz-tools/commit/895310211d36796d995c37f1929a12458195d4c7)) |
| 19 | +* **grzctl:** implement Prüfbericht generation using submission ID from database ([#525](https://github.com/BfArM-MVH/grz-tools/issues/525)) ([fa09ffd](https://github.com/BfArM-MVH/grz-tools/commit/fa09ffda89a014614bbef51365ea0ac8d4af250f)) |
| 20 | +* **grzctl:** Make 'identifiers.le' config optional for 'grzctl report' command ([#488](https://github.com/BfArM-MVH/grz-tools/issues/488)) ([f065e5a](https://github.com/BfArM-MVH/grz-tools/commit/f065e5a8115bd3ff791b0657ff2513c9e4c2f076)) |
| 21 | +* **grzctl:** submission-id for grzctl report with option --with-submission-ids ([#539](https://github.com/BfArM-MVH/grz-tools/issues/539)) ([8765e88](https://github.com/BfArM-MVH/grz-tools/commit/8765e88627b0a3a7665e2711310cabd5b54d8972)) |
| 22 | + |
| 23 | + |
| 24 | +### Bug Fixes |
| 25 | + |
| 26 | +* **grz-pydantic-models,grz-cli,grzctl:** Fix MII Consent Period to use datetime instead of date ([#491](https://github.com/BfArM-MVH/grz-tools/issues/491)) ([0eb69fd](https://github.com/BfArM-MVH/grz-tools/commit/0eb69fd9f0c63360ed19f20b1468ab0700270c81)) |
| 27 | +* **grzctl:** accept `THRESHOLD NOT MET` as valid QC status in populate-qc ([#529](https://github.com/BfArM-MVH/grz-tools/issues/529)) ([6dac1d4](https://github.com/BfArM-MVH/grz-tools/commit/6dac1d499947bd1f7e28adf7361dda40c6f45345)) |
| 28 | +* **grzctl:** fix displayed QC stats ([#508](https://github.com/BfArM-MVH/grz-tools/issues/508)) ([4a175e7](https://github.com/BfArM-MVH/grz-tools/commit/4a175e7f8091fb3ded8e8354b89b6d2a243993cf)), closes [#451](https://github.com/BfArM-MVH/grz-tools/issues/451) |
| 29 | +* handle `THRESHOLD NOT MET` QCStatus in `populate-qc` command ([6dac1d4](https://github.com/BfArM-MVH/grz-tools/commit/6dac1d499947bd1f7e28adf7361dda40c6f45345)) |
| 30 | +* **repo:** Update dependencies ([#498](https://github.com/BfArM-MVH/grz-tools/issues/498)) ([368dfdb](https://github.com/BfArM-MVH/grz-tools/commit/368dfdbaa703f17f0c290ea051be30f9be4bebf3)) |
| 31 | + |
3 | 32 | ## [1.4.0](https://github.com/BfArM-MVH/grz-tools/compare/grzctl-v1.3.0...grzctl-v1.4.0) (2025-12-04) |
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