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6623 lines (6623 loc) · 319 KB
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"val" : "https://orcid.org/0009-0009-9778-4641"
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"pred" : "http://purl.org/dc/terms/description",
"val" : "PHASES provides an ontology for integrating research in solitude and gerotranscendence. By integrating these areas of study, we aim to deepen our understanding of each and how they promote healthy aging."
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_003000",
"lbl" : "behaviour change intervention",
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},
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_006014",
"lbl" : "social alienation",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A <mental disposition> to perceive or experience oneself as isolated from and not meaningfully involved in social groups."
},
"basicPropertyValues" : [ {
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_006064",
"lbl" : "psychological need",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A <mental disposition> of a person to act to obtain or maintain a particular state due to this state’s importance to the person’s wellbeing."
},
"comments" : [ "Psychological needs can be satisfied or thwarted." ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Coping\" in the Health Behaviour Internalisation Model"
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"val" : " \"Hierarchy of Walking Needs\" in the Social Ecological Model of Walking"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Motives\" in the PRIME theory"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Needs\" in the CEOS Theory"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Needs\" in the Needs-Opportunity-Abilities Model"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Needs\" in the Self-Determination Theory"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Ownership\" in the Health Behaviour Internalisation Model"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : " \"Support\" in the Health Behaviour Internalisation Model"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "\"Preference\" in the Health Behaviour Internalisation Model"
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}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_006085",
"lbl" : "location",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A spatial <quality> that inheres in a bearer by virtue of its position relative to other entities."
},
"comments" : [ "An intervention could be used to rearrange objects in an environment, changing the location of a person relative to these objects and thereby increasing the likelihood of a behaviour." ],
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_028000",
"lbl" : "behaviour change intervention scenario plan",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A plan that is realized in a BCI scenario process."
},
"basicPropertyValues" : [ {
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}
}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_034000",
"lbl" : "population behaviour",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "An aggregate of individual human behaviours of members of a population."
},
"comments" : [ "The class human behaviour [BCIO:042000] has been made obsolete. If you want to refer to the behaviour of an individual, refer to individual human behaviour . If you want to refer to the behaviour of a group, refer to population behaviour." ],
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}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_036000",
"lbl" : "individual human behaviour",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A bodily process of a human that involves co-ordinated contraction of striated muscles controlled by the brain."
},
"comments" : [ " it is concerned with moving skeletal parts to which it is usually attached.' (https://www.collinsdictionary.com/dictionary/english/striped-muscle)", "The class human behaviour [BCIO:042000] has been made obsolete. If you want to refer to the behaviour of an individual, refer to individual human behaviour . If you want to refer to the behaviour of a group, refer to population behaviour.\n\nStriated muscles referred to in the definition do not ordinarily involve cardiac muscles.\n\nBehaviours are usually in response to an internal or external stimuli.\n\nEvery behaviour is associated with mental processes, but not every mental process is associated with behaviour. For instance, a verbal communication behaviour will involve mental processes to produce speech. However, mental processes associated with listening can occur without a person performing a behaviour.\n\n'behaviours' can involve a series of activities (e.g., more granular behaviours).\n\n'A 'striated muscle' can defined as 'a type of contractile tissue that is marked by transverse striations" ],
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"val" : "Also referred to in definitions as human behaviour or just behaviour."
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"val" : "walks for 15 mins/day, never eats meat, attends school daily"
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}, {
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_036001",
"lbl" : "human life function",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A function that inheres in a human being and is realised in processes that enable the human to survive and thrive."
},
"comments" : [ "There are complex sets of processes involved in the realisation of human life functions, only some which would behaviours. An example for a human life function that is not a behaviour function: human thermoregulation via sweating function. However, some behaviours can fulfil 'human life functions'.\n\nThe term 'survive' refers to continuing one's existence (e.g., staying alive), while 'thrive' includes a wide range of processes that improve an animal's life, including physical and mental wellbeing and experiencing positive social interactions, as well as being able to reproduce. Many processes can contribute to a human surviving and thriving." ],
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"val" : "Learning function (e.g., knowledge development function and skill development function), knowledge or skill maintenance, protection of self, others and the environment, aesthetics function, bodily health function, spiritual function, social organisation function,, excretion function, nutrition function, reproductive function, respiration function,, rest function, travel function, thermoregulation function"
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"val" : "Published"
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}
}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_036107",
"lbl" : "process aggregate",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "An occurrent consisting exactly of a plurality of processes that are process_aggregate_member_parts_of that occurrent for all times at which it exists."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000114",
"val" : "Published"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000232",
"val" : "Process aggregate extends BFO in the same way that object aggregate extends its coverage of material entities. It is required to be able to classify occurrents such as behaviour patterns that are repeated occurrences of classes of process that have properties such as average frequency of occurrence (not to be confused with frequency as a process profile) and temporal patterning of occurrences."
}, {
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}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_037000",
"lbl" : "intervention",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A planned process that has the aim of influencing an outcome."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "Examples of interventions are putting health warnings on cigarette packets, providing free stop smoking services and banning smoking in public places."
}, {
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"val" : "Published"
}, {
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"id" : "http://humanbehaviourchange.org/ontology/BCIO_042000",
"lbl" : "human behaviour",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A process that is an individual human behaviour or a population behaviour."
},
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}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_043000",
"lbl" : "process attribute",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A process profile that is an attribute of a process."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "This is intended to provide a user-friendly way of representing the way in which processes are manifest. This is somewhat similar to, but not the same as, the class 'specifically dependent continuant' in Basic Formal Ontology which provides a way of representing features of material entities such as age and size. It is formally equivalent to process profile in Basic Formal Ontology."
}, {
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}, {
"id" : "http://humanbehaviourchange.org/ontology/BCIO_050435",
"lbl" : "behavioural attribute",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A process attribute of an individual human behaviour."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "physical performance behaviour has_behavioural_attribute behavioural attribute"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000114",
"val" : "Published"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://humanbehaviourchange.org/ontology/bcio.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000001",
"lbl" : "entity",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "An entity is anything that exists or has existed or will exist."
},
"xrefs" : [ {
"val" : "https://www.wikidata.org/wiki/Q35120"
} ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "entity"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Entity"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000111",
"val" : "entity"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "Julius Caesar"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "Verdi’s Requiem"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the Second World War"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "your body mass index"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: In all areas of empirical inquiry we encounter general terms of two sorts. First are general terms which refer to universals or types:animaltuberculosissurgical procedurediseaseSecond, are general terms used to refer to groups of entities which instantiate a given universal but do not correspond to the extension of any subuniversal of that universal because there is nothing intrinsic to the entities in question by virtue of which they – and only they – are counted as belonging to the given group. Examples are: animal purchased by the Emperortuberculosis diagnosed on a Wednesdaysurgical procedure performed on a patient from Stockholmperson identified as candidate for clinical trial #2056-555person who is signatory of Form 656-PPVpainting by Leonardo da VinciSuch terms, which represent what are called ‘specializations’ in [81"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "Entity doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example Werner Ceusters 'portions of reality' include 4 sorts, entities (as BFO construes them), universals, configurations, and relations. It is an open question as to whether entities as construed in BFO will at some point also include these other portions of reality. See, for example, 'How to track absolutely everything' at http://www.referent-tracking.com/_RTU/papers/CeustersICbookRevised.pdf"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/dron.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/envo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/iao.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ico.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/mondo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/oae.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obi.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obib.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ogms.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/omrse.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "An entity is anything that exists or has existed or will exist. (axiom label in BFO2 Reference: [001-001])"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
}, {
"pred" : "https://schema.org/alternateName",
"val" : "entities"
}, {
"pred" : "https://www.wikidata.org/wiki/Property:P5191",
"val" : "entitātem"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000002",
"lbl" : "continuant",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "An entity that exists in full at any time in which it exists at all, persists through time while maintaining its identity and has no temporal parts."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "continuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Continuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000111",
"val" : "continuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: Continuant entities are entities which can be sliced to yield parts only along the spatial dimension, yielding for example the parts of your table which we call its legs, its top, its nails. ‘My desk stretches from the window to the door. It has spatial parts, and can be sliced (in space) in two. With respect to time, however, a thing is a continuant.’ [60, p. 240"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "Continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. For example, in an expansion involving bringing in some of Ceuster's other portions of reality, questions are raised as to whether universals are continuants"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/dron.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/envo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/iao.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/oae.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obi.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obib.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ogms.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/omrse.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/pato.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ro.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "A continuant is an entity that persists, endures, or continues to exist through time while maintaining its identity. (axiom label in BFO2 Reference: [008-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "if b is a continuant and if, for some t, c has_continuant_part b at t, then c is a continuant. (axiom label in BFO2 Reference: [126-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "if b is a continuant and if, for some t, cis continuant_part of b at t, then c is a continuant. (axiom label in BFO2 Reference: [009-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "if b is a material entity, then there is some temporal interval (referred to below as a one-dimensional temporal region) during which b exists. (axiom label in BFO2 Reference: [011-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x y) (if (and (Continuant x) (exists (t) (continuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [009-002] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x y) (if (and (Continuant x) (exists (t) (hasContinuantPartOfAt y x t))) (Continuant y))) // axiom label in BFO2 CLIF: [126-001] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Continuant x) (Entity x))) // axiom label in BFO2 CLIF: [008-002] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Material Entity x) (exists (t) (and (TemporalRegion t) (existsAt x t))))) // axiom label in BFO2 CLIF: [011-002] "
}, {
"pred" : "http://purl.unep.org/sdg/SDGIO_00010069",
"val" : "true"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000003",
"lbl" : "occurrent",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "An entity that has temporal parts and that happens, unfolds or develops through time."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "occurrent"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Occurrent"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: every occurrent that is not a temporal or spatiotemporal region is s-dependent on some independent continuant that is not a spatial region"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: s-dependence obtains between every process and its participants in the sense that, as a matter of necessity, this process could not have existed unless these or those participants existed also. A process may have a succession of participants at different phases of its unfolding. Thus there may be different players on the field at different times during the course of a football game; but the process which is the entire game s-depends_on all of these players nonetheless. Some temporal parts of this process will s-depend_on on only some of the players."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "Occurrent doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. An example would be the sum of a process and the process boundary of another process."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "Simons uses different terminology for relations of occurrents to regions: Denote the spatio-temporal location of a given occurrent e by 'spn[e]' and call this region its span. We may say an occurrent is at its span, in any larger region, and covers any smaller region. Now suppose we have fixed a frame of reference so that we can speak not merely of spatio-temporal but also of spatial regions (places) and temporal regions (times). The spread of an occurrent, (relative to a frame of reference) is the space it exactly occupies, and its spell is likewise the time it exactly occupies. We write 'spr[e]' and `spl[e]' respectively for the spread and spell of e, omitting mention of the frame."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "An occurrent is an entity that unfolds itself in time or it is the instantaneous boundary of such an entity (for example a beginning or an ending) or it is a temporal or spatiotemporal region which such an entity occupies_temporal_region or occupies_spatiotemporal_region. (axiom label in BFO2 Reference: [077-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "Every occurrent occupies_spatiotemporal_region some spatiotemporal region. (axiom label in BFO2 Reference: [108-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "b is an occurrent entity iff b is an entity that has temporal parts. (axiom label in BFO2 Reference: [079-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Occurrent x) (exists (r) (and (SpatioTemporalRegion r) (occupiesSpatioTemporalRegion x r))))) // axiom label in BFO2 CLIF: [108-001] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (iff (Occurrent x) (and (Entity x) (exists (y) (temporalPartOf y x))))) // axiom label in BFO2 CLIF: [079-001] "
}, {
"pred" : "http://purl.unep.org/sdg/SDGIO_00010069",
"val" : "true"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000004",
"lbl" : "independent continuant",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "b is an independent continuant = Def. b is a continuant which is such that there is no c and no t such that b s-depends_on c at t. (axiom label in BFO2 Reference: [017-002])"
},
"comments" : [ "A continuant that is a bearer of quality and realizable entity entities, in which other entities inhere and which itself cannot inhere in anything." ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "ic"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "IndependentContinuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a chair"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a heart"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a leg"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a molecule"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a spatial region"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "an atom"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "an orchestra."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "an organism"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the bottom right portion of a human torso"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the interior of your mouth"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000589",
"val" : "anatomical entity (BFO)"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "For any independent continuant b and any time t there is some spatial region r such that b is located_in r at t. (axiom label in BFO2 Reference: [134-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "For every independent continuant b and time t during the region of time spanned by its life, there are entities which s-depends_on b during t. (axiom label in BFO2 Reference: [018-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x t) (if (IndependentContinuant x) (exists (r) (and (SpatialRegion r) (locatedInAt x r t))))) // axiom label in BFO2 CLIF: [134-001] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x t) (if (and (IndependentContinuant x) (existsAt x t)) (exists (y) (and (Entity y) (specificallyDependsOnAt y x t))))) // axiom label in BFO2 CLIF: [018-002] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(iff (IndependentContinuant a) (and (Continuant a) (not (exists (b t) (specificallyDependsOnAt a b t))))) // axiom label in BFO2 CLIF: [017-002] "
}, {
"pred" : "http://purl.unep.org/sdg/SDGIO_00010069",
"val" : "true"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000015",
"lbl" : "process",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "p is a process = Def. p is an occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t. (axiom label in BFO2 Reference: [083-003])"
},
"comments" : [ "An occurrent that has temporal proper parts and for some time t, p s-depends_on some material entity at t." ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "process"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Process"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a process of cell-division, \\ a beating of the heart"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a process of meiosis"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "a process of sleeping"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the course of a disease"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the flight of a bird"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the life of an organism"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "your process of aging."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: The realm of occurrents is less pervasively marked by the presence of natural units than is the case in the realm of independent continuants. Thus there is here no counterpart of ‘object’. In BFO 1.0 ‘process’ served as such a counterpart. In BFO 2.0 ‘process’ is, rather, the occurrent counterpart of ‘material entity’. Those natural – as contrasted with engineered, which here means: deliberately executed – units which do exist in the realm of occurrents are typically either parasitic on the existence of natural units on the continuant side, or they are fiat in nature. Thus we can count lives; we can count football games; we can count chemical reactions performed in experiments or in chemical manufacturing. We cannot count the processes taking place, for instance, in an episode of insect mating behavior.Even where natural units are identifiable, for example cycles in a cyclical process such as the beating of a heart or an organism’s sleep/wake cycle, the processes in question form a sequence with no discontinuities (temporal gaps) of the sort that we find for instance where billiard balls or zebrafish or planets are separated by clear spatial gaps. Lives of organisms are process units, but they too unfold in a continuous series from other, prior processes such as fertilization, and they unfold in turn in continuous series of post-life processes such as post-mortem decay. Clear examples of boundaries of processes are almost always of the fiat sort (midnight, a time of death as declared in an operating theater or on a death certificate, the initiation of a state of war)"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(iff (Process a) (and (Occurrent a) (exists (b) (properTemporalPartOf b a)) (exists (c t) (and (MaterialEntity c) (specificallyDependsOnAt a c t))))) // axiom label in BFO2 CLIF: [083-003] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000016",
"lbl" : "disposition",
"type" : "CLASS",
"meta" : {
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "disposition"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Disposition"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "an atom of element X has the disposition to decay to an atom of element Y"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "certain people have a predisposition to colon cancer"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "children are innately disposed to categorize objects in certain ways."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the cell wall is disposed to filter chemicals in endocytosis and exocytosis"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: Dispositions exist along a strength continuum. Weaker forms of disposition are realized in only a fraction of triggering cases. These forms occur in a significant number of cases of a similar type."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "b is a disposition means: b is a realizable entity & b’s bearer is some material entity & b is such that if it ceases to exist, then its bearer is physically changed, & b’s realization occurs when and because this bearer is in some special physical circumstances, & this realization occurs in virtue of the bearer’s physical make-up. (axiom label in BFO2 Reference: [062-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "If b is a realizable entity then for all t at which b exists, b s-depends_on some material entity at t. (axiom label in BFO2 Reference: [063-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x t) (if (and (RealizableEntity x) (existsAt x t)) (exists (y) (and (MaterialEntity y) (specificallyDepends x y t))))) // axiom label in BFO2 CLIF: [063-002] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Disposition x) (and (RealizableEntity x) (exists (y) (and (MaterialEntity y) (bearerOfAt x y t)))))) // axiom label in BFO2 CLIF: [062-002] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000017",
"lbl" : "realizable entity",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A specifically dependent continuant that inheres in continuant entities and are not exhibited in full at every time in which it inheres in an entity or group of entities. The exhibition or actualization of a realizable entity is a particular manifestation, functioning or process that occurs under certain circumstances."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "realizable"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "RealizableEntity"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the disposition of this piece of metal to conduct electricity."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the disposition of your blood to coagulate"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the function of your reproductive organs"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the role of being a doctor"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the role of this boundary to delineate where Utah and Colorado meet"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/dron.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/envo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obi.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obib.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ogms.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/omrse.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "To say that b is a realizable entity is to say that b is a specifically dependent continuant that inheres in some independent continuant which is not a spatial region and is of a type instances of which are realized in processes of a correlated type. (axiom label in BFO2 Reference: [058-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "All realizable dependent continuants have independent continuants that are not spatial regions as their bearers. (axiom label in BFO2 Reference: [060-002])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x t) (if (RealizableEntity x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (bearerOfAt y x t))))) // axiom label in BFO2 CLIF: [060-002] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (RealizableEntity x) (and (SpecificallyDependentContinuant x) (exists (y) (and (IndependentContinuant y) (not (SpatialRegion y)) (inheresIn x y)))))) // axiom label in BFO2 CLIF: [058-002] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000019",
"lbl" : "quality",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized."
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "quality"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Quality"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the ambient temperature of this portion of air"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the color of a tomato"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the length of the circumference of your waist"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the mass of this piece of gold."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the shape of your nose"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the shape of your nostril"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000114",
"val" : "External"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "a quality is a specifically dependent continuant that, in contrast to roles and dispositions, does not require any further process in order to be realized. (axiom label in BFO2 Reference: [055-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000601",
"val" : "If an entity is a quality at any time that it exists, then it is a quality at every time that it exists. (axiom label in BFO2 Reference: [105-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Quality x) (SpecificallyDependentContinuant x))) // axiom label in BFO2 CLIF: [055-001] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (exists (t) (and (existsAt x t) (Quality x))) (forall (t_1) (if (existsAt x t_1) (Quality x))))) // axiom label in BFO2 CLIF: [105-001] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000020",
"lbl" : "specifically dependent continuant",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "b is a specifically dependent continuant = Def. b is a continuant and there is some independent continuant c which is not a spatial region and which is such that b s-depends_on c at every time t during the course of b’s existence. (axiom label in BFO2 Reference: [050-003])"
},
"comments" : [ "A continuant that inheres in or is borne by other entities. Every instance of A requires some specific instance of B which must always be the same." ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "sdc"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "SpecificallyDependentContinuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000111",
"val" : "specifically dependent continuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "of one-sided specifically dependent continuants: the mass of this tomato"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the disposition of this fish to decay"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the function of this heart: to pump blood"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the mutual dependence of proton donors and acceptors in chemical reactions [79"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the pink color of a medium rare piece of grilled filet mignon at its center"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the role of being a doctor"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the shape of this hole."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the smell of this portion of mozzarella"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000114",
"val" : "External"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "Specifically dependent continuant doesn't have a closure axiom because the subclasses don't necessarily exhaust all possibilites. We're not sure what else will develop here, but for example there are questions such as what are promises, obligation, etc."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/dron.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/envo.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/iao.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/oae.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obi.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/obib.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ogms.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/omrse.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/pato.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000412",
"val" : "http://purl.obolibrary.org/obo/ro.owl"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(iff (RelationalSpecificallyDependentContinuant a) (and (SpecificallyDependentContinuant a) (forall (t) (exists (b c) (and (not (SpatialRegion b)) (not (SpatialRegion c)) (not (= b c)) (not (exists (d) (and (continuantPartOfAt d b t) (continuantPartOfAt d c t)))) (specificallyDependsOnAt a b t) (specificallyDependsOnAt a c t)))))) // axiom label in BFO2 CLIF: [131-004] "
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(iff (SpecificallyDependentContinuant a) (and (Continuant a) (forall (t) (if (existsAt a t) (exists (b) (and (IndependentContinuant b) (not (SpatialRegion b)) (specificallyDependsOnAt a b t))))))) // axiom label in BFO2 CLIF: [050-003] "
}, {
"pred" : "http://purl.unep.org/sdg/SDGIO_00010069",
"val" : "true"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso",
"val" : "https://github.com/OBOFoundry/COB/issues/65"
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#seeAlso",
"val" : "https://github.com/oborel/obo-relations/pull/284"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000031",
"lbl" : "generically dependent continuant",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "b is a generically dependent continuant = Def. b is a continuant that g-depends_on one or more other entities. (axiom label in BFO2 Reference: [074-001])"
},
"comments" : [ "A continuant that is dependent on one or other independent continuant bearers. For every instance of A requires some instance of (an independent continuant type) B but which instance of B serves can change from time to time." ],
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "gdc"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "GenericallyDependentContinuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000111",
"val" : "generically dependent continuant"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the pdf file on your laptop, the pdf file that is a copy thereof on my laptop"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(iff (GenericallyDependentContinuant a) (and (Continuant a) (exists (b t) (genericallyDependsOnAt a b t)))) // axiom label in BFO2 CLIF: [074-001] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",
"val" : "http://purl.obolibrary.org/obo/bfo.owl"
} ]
}
}, {
"id" : "http://purl.obolibrary.org/obo/BFO_0000034",
"lbl" : "function",
"type" : "CLASS",
"meta" : {
"definition" : {
"val" : "A disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"
},
"basicPropertyValues" : [ {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000179",
"val" : "function"
}, {
"pred" : "http://purl.obolibrary.org/obo/BFO_0000180",
"val" : "Function"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the function of a hammer to drive in nails"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the function of a heart pacemaker to regulate the beating of a heart through electricity"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000112",
"val" : "the function of amylase in saliva to break down starch into sugar"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000114",
"val" : "External"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000116",
"val" : "BFO 2 Reference: In the past, we have distinguished two varieties of function, artifactual function and biological function. These are not asserted subtypes of BFO:function however, since the same function – for example: to pump, to transport – can exist both in artifacts and in biological entities. The asserted subtypes of function that would be needed in order to yield a separate monoheirarchy are not artifactual function, biological function, etc., but rather transporting function, pumping function, etc."
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000600",
"val" : "A function is a disposition that exists in virtue of the bearer’s physical make-up and this physical make-up is something the bearer possesses because it came into being, either through evolution (in the case of natural biological entities) or through intentional design (in the case of artifacts), in order to realize processes of a certain sort. (axiom label in BFO2 Reference: [064-001])"
}, {
"pred" : "http://purl.obolibrary.org/obo/IAO_0000602",
"val" : "(forall (x) (if (Function x) (Disposition x))) // axiom label in BFO2 CLIF: [064-001] "
}, {
"pred" : "http://www.w3.org/2000/01/rdf-schema#isDefinedBy",