feat!: filter values from Layout folders #20
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: ["main"] | |
| tags: ["*"] | |
| pull_request: | |
| branches: ["main"] | |
| jobs: | |
| unit_tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Setup micromamba | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: test-env | |
| init-shell: >- | |
| bash | |
| cache-environment: true | |
| post-cleanup: 'all' | |
| create-args: >- | |
| python=3.12 | |
| pip | |
| docstring_parser | |
| fsspec | |
| h5netcdf | |
| jinja2 | |
| netCDF4 | |
| numba | |
| numpy | |
| requests | |
| typer | |
| xarray | |
| pytest | |
| pytest-cov | |
| sympy | |
| beautifulsoup4 | |
| pyftpdlib | |
| shapely | |
| geopandas | |
| pyinterp<2026.2.0 | |
| dask | |
| - name: Install python dependencies | |
| shell: bash -el {0} | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pyasynchat | |
| pip install -e "." | |
| - name: Run unit tests | |
| shell: bash -el {0} | |
| run: | | |
| pytest tests --cov=src/fcollections --cov-report=xml:coverage-ut.xml --cov-report=term | |
| mv .coverage .coverage-ut | |
| - name: Upload unit test coverage artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: unit-test-coverage | |
| include-hidden-files: true | |
| path: | | |
| .coverage-ut | |
| coverage-ut.xml | |
| unit_tests_no_geo: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Setup micromamba | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: test-env | |
| init-shell: >- | |
| bash | |
| cache-environment: true | |
| post-cleanup: 'all' | |
| create-args: >- | |
| python=3.12 | |
| pip | |
| docstring_parser | |
| fsspec | |
| h5netcdf | |
| jinja2 | |
| netCDF4 | |
| numba | |
| numpy | |
| requests | |
| typer | |
| xarray | |
| pytest | |
| pytest-cov | |
| sympy | |
| beautifulsoup4 | |
| pyftpdlib | |
| shapely | |
| geopandas | |
| pyinterp<2026.2.0 | |
| dask | |
| - name: Install python dependencies | |
| shell: bash -el {0} | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e "." | |
| - name: Run unit tests without geo | |
| shell: bash -el {0} | |
| run: | | |
| pytest tests/implementations/collections --ignore tests/implementations/collections/test_area_selector.py --without-geo-packages --cov=src/fcollections --cov-report=xml:coverage-ut-nogeo.xml --cov-report=term | |
| mv .coverage .coverage-ut-nogeo | |
| - name: Upload unit test no-geo coverage artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: unit-test-nogeo-coverage | |
| include-hidden-files: true | |
| path: | | |
| .coverage-ut-nogeo | |
| coverage-ut-nogeo.xml | |
| integration_tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.12 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e ".[testing]" | |
| - name: Run integration tests | |
| run: | | |
| pytest integration_tests --cov=src/fcollections --cov-report=xml:coverage-it.xml --cov-report=term | |
| mv .coverage .coverage-it | |
| - name: Upload integration test coverage artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: integration-test-coverage | |
| include-hidden-files: true | |
| path: | | |
| .coverage-it | |
| coverage-it.xml | |
| coverage: | |
| runs-on: ubuntu-latest | |
| needs: | |
| - unit_tests | |
| - unit_tests_no_geo | |
| - integration_tests | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.11 | |
| - name: Install coverage | |
| run: pip install coverage | |
| - name: Download unit tests coverage artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: unit-test-coverage | |
| - name: Download unit tests no geo coverage artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: unit-test-nogeo-coverage | |
| - name: Download integration tests coverage artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: integration-test-coverage | |
| - name: Combine coverage reports | |
| run: | | |
| coverage combine .coverage-ut .coverage-ut-nogeo .coverage-it | |
| coverage report --fail-under=100 | |
| coverage xml | |
| - name: Upload combined coverage report | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: combined-coverage | |
| path: coverage.xml |