How do we start running cBathy and does it related to UAV tool Box?

[sivaiahborra]

Dear All,
I have successfully done sample run in UAV Tool Box and could produce Timex, Bright and Dark images, I got stuck to proceed further to produce bathymetry by using cBathy tool box. I have a query that how UAV tool box is connected with cBathy tool box? I mean are the outputs of UAV will be used as input for cBathy like that? I got stuck there. Please anyone let me how to proceed further and how to run cBathy tool box?
Thanking you.

[lalafreguete]

I am having the same issue.

[SRHarrison]

If you created a 'grid' pixel instrument during the UAV Toolbox collection, then there should be a .mat output timestack with the 'mBW' string in its filename. That is the timestack over the grid that cBathy uses as the signal to process.
Other site-specific cBathy input should be modified in a file like argus02a.m
Follow along some of the demo files to see how cBathy is used in context. E.g. cBathyDemoWithPlots.m

[lalafreguete]

Good morning, Mr. Harrison. Thank you for your response. I have posted in the UAV Toolbox Forum as well about this issue:  I have been able to run the demoCbathy or either the cBathyDemoWithPlots. But at the time the analyzeSingleBathyRunNotCIL function is called I am having this type of error. For some reason, the sampleAerielleVideoDemoPIx script is calculating wrongly the first r.cam.xyz. Larissa Marques Freguete, M.S. Graduate Research Assistant Measurement Analytics (MANTIS) Lab Conrad Blucher Institute for Surveying Science Texas A&M University - Corpus Christi NRC 3401 lfreguete@islander.tamucc.edu [mantis_logo]<https://mantisresearch.org/>

…

________________________________ From: Shawn Harrison <notifications@github.com> Sent: Monday, October 19, 2020 8:39 AM To: Coastal-Imaging-Research-Network/Forum-Wiki <Forum-Wiki@noreply.github.com> Cc: Freguete, Larissa <lfreguete@islander.tamucc.edu>; Comment <comment@noreply.github.com> Subject: Re: [Coastal-Imaging-Research-Network/Forum-Wiki] How do we start running cBathy and does it related to UAV tool Box? (#39) If you created a 'grid' pixel instrument during the UAV Toolbox collection, then there should be a .mat output timestack with the 'mBW' string in its filename. That is the timestack over the grid that cBathy uses as the signal to process. Other site-specific cBathy input should be modified in a file like argus02a.m Follow along some of the demo files to see how cBathy is used in context. E.g. cBathyDemoWithPlots.m — You are receiving this because you commented. Reply to this email directly, view it on GitHub<https://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.qkg1.top%2FCoastal-Imaging-Research-Network%2FForum-Wiki%2Fissues%2F39%23issuecomment-712162903&data=04%7C01%7Clfreguete%40islander.tamucc.edu%7C75fd569526c24863dcb308d874345836%7C34cbfaf167a64781a9ca514eb2550b66%7C0%7C0%7C637387115457049615%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=6yvgX3vXFiyJ7mBrMyMMiswwwTJKC8dXJELxtjW7204%3D&reserved=0>, or unsubscribe<https://nam12.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.qkg1.top%2Fnotifications%2Funsubscribe-auth%2FARNTAJ5P7ZN7I5NHLNEYSLTSLQ6PPANCNFSM4OH43ELA&data=04%7C01%7Clfreguete%40islander.tamucc.edu%7C75fd569526c24863dcb308d874345836%7C34cbfaf167a64781a9ca514eb2550b66%7C0%7C0%7C637387115457049615%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C1000&sdata=nips4iFwFwheJ8F4VGTB1y1InMaekj7eEoNusl5ueyE%3D&reserved=0>.

[lalafreguete]

There is also another issue I am finding when using the UAV Toolbox: in the demoInputFile, if the xyCam and zCam are inputs in a real world coordinates, the algorithm does not work well for undistorting the UV coordinates.

[Manuelatavorad]

Have you made any progress on applying cBathy? I'm having the same problems. My processing breaks at the analyzeSingleBathyRunNotCIL function.

[lalafreguete]

Good morning, Manuela.

It's been a while since I have worked with this tool. Could you share a screen shot of your error message, snip of the code line with the issue and, if it is related to an input, the list of discription of the variable been shown at the variables section?

Regards.