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<!DOCTYPE html>
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<title>Ella Crotty</title>
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<header>
<h1 style='text-align: center;'>Ella Crotty</h1>
<nav>
<container>
<a margin-left: 0px;' href="./index.html"><strong>Home</strong></a>
<a margin-left: 0px;' href="./CV.html"><strong>CV</strong></a>
<a margin-left: 0px;' href="./PublicationsPresentations.html"><strong>Publications & Presentations</strong></a>
<a margin-left: 0px;' href="./Research.html"><strong>Research</strong></a>
<a margin-left: 0px;' href="./TeachingOutreach.html"><strong>Teaching & Outreach</strong></a>
<a margin-left: 0px;' href="./Illustration.html"><strong>Illustration</strong></a>
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<main>
<h1>Research Experience</h1>
<p><strong>Sep 2025-Present | Lab Volunteer, Scripps Institution of Oceanography</strong></p>
<p>CalCOFI and Semmens lab volunteer assisting graduate students and postdocs. Sampled environmental DNA for CalCOFI, on a
ten-day research cruise in Fall 2025 and a planned 16-day research cruise in Summer 2026. Assisted with DNA extractions,
gel electrophoresis, fish dissections, video sampling of leopard sharks, and picking out fish scales and foraminifera from
sediment cores.</p>
<p><strong>Sep 2024-Apr 2025 | Reed College Senior Thesis</strong></p>
<p>My undergraduate senior thesis was a continuation of my Hollings internship (see below), focused on copepods. I used a dataset
of environmental DNA species identificartions and paired environmental data to investigate the susceptibility of different species
of copepods to hypoxia.</p>
<embed src="thesis.pdf" width="700" height="500" type="application/pdf">
<p><strong>Jun-Aug 2024 | NOAA Ernest F. Hollings Program Intern, Pacific Marine Environmental Laboratory (PMEL)</strong></p>
<p>Participated in a 10-week NOAA Hollings Program internship in the Ocean Molecular Ecology lab at PMEL. Combined data
from an automated environmental DNA (eDNA) sampler with oceanographic data from a mooring at the same location to investigate
the relationship between species presence and oxygen saturation. Participated in field eDNA sampling and filtration as well
as sampler cleaning and preparation. Presented results to PMEL and the NOAA Ernest F. Hollings Program Symposium. I wrote about my research
in <a href="https://www.pmel.noaa.gov/ocean-molecular-ecology/news-story/investigating-effects-seasonal-hypoxia-marine-species-using-environmental-dna">
this blog post.</a></p>
<p>I presented this talk at the Western Society of Naturalists 2024 conference:</p>
<embed src="WSN24 Presentation.pdf" width="1000" height="700" type="application/pdf">
<img src="EllaWSN24Hollings.jpeg" height="300" alt="Me presenting a talk at a conference">
<p>Image credits: Sadie Gardiner, NOAA Hollings Scholarship Program</p>
<p>And this poster at the American Geophysical Union 2024 (virtual due to illness) and the Reed College Summer Research Symposium:</p>
<embed src="Crotty.Eleanor.2024PosterSession.PNG" width="1000" height="700">
<p><strong>Jun-Aug 2023 | REU Intern, Wetherbee Lab at University of Rhode Island</strong></p>
<p>Participated in the URI Graduate School of Oceanography SURFO program as an intern, attending career development
and science writing workshops. Analyzed data from a decade of acoustic and satellite telemetry shark tagging in
order to identify the environmental cues that lead sand tiger sharks to leave their aggregation sites on the US East Coast in
order to identify potential explanations for shark migration patterns. Completed a final write-up and presentation.</p>
<p>I presented a talk at the REU symposium, and this poster at the Ocean Sciences Meeting 2023:</p>
<img src="OSM24_Poster_ResearchGate.PNG" width="1000" height="700">
<img src="URI_REU_Presentation1.jpeg" height="300" alt="Me presenting a talk in an auditorium">
<img src="SharkPosterOSMElla.jpeg" height="300" alt="Me presenting a poster at a conference, holding a stuffed animal shark.">
<p><strong>May-Aug 2022 | Lab Intern, Reyns Lab at University of San Diego</strong></p>
<p>Shadowed a graduate student working to measure seasonal growth of <italic>Amathia verticillata</italic> and assisted her with YSI probe
sampling, collecting <italic>A. verticillata</italic> samples, and data entry. Conducted an independent research project to quantify
reproduction in the barnacle <italic>Chthamalus fissus</italic> on the southern California coast. Measured barnacle diameters & weights
and counted eggs and parasites, then conducted data analysis and concluded that barnacle mass varies seasonally, barnacles
with greater mass have larger broods, and the connection between season, lunar phase, and brood size needs to be investigated further.</p>
<p>I presented this poster at the Western Society of Naturalists 2022 conference:</p>
<embed src="Ella_Crotty_WSN_Poster_2022.PNG" width="1000" height="700">
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