Merge pull request #1644 from HumanCellAtlas/iz-gut-patch

Add values to radial_tissue_term enum

Author: idazucchi

changelog.md

@@ -6,8 +6,14 @@ Starting after v5.0.0 release, updates will be declared for schemas independentl
 and (starting with v4.0.0) this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html). Unreleased changes may be indicated under the `Unreleased` heading.
 
 ## [Unreleased](https://github.com/HumanCellAtlas/metadata-schema/tree/staging)
+
 ## [Released](https://github.com/HumanCellAtlas/metadata-schema/)
 
+### [type/biomaterial/specimen_from_organism.json - v11.1.1] - 2026-02-09
+### Added
+Added values to radial_tissue_term enum
+
+
 ### [module/biomaterial/residence.json - v1.0.4] - 2026-02-09
 ### Fixed
 Fixed describedBy pattern and type keyword to country_territory

docs/jsonBrowser/type.md

@@ -350,7 +350,7 @@ biomaterial_core | Core biomaterial-level information. | object | yes | [See cor
 genus_species | The scientific binomial name for the species of the specimen. | array | no | [See module  species_ontology](module.md#species-ontology) | Genus species |  | 
 organ | The organ that the biomaterial came from. | object | yes | [See module  organ_ontology](module.md#organ-ontology) | Organ |  | 
 organ_parts | A term for a specific part of the organ that the biomaterial came from. | array | no | [See module  organ_part_ontology](module.md#organ-part-ontology) | Organ part |  | 
-radial_tissue_term | Layer(s) of the gut that was/were sampled. | array | no |  | Radial tissue term | EPI, LP, MLN, MUSC, SUB | EPI; LP; MUSC; SUB; MLN
+radial_tissue_term | Layer(s) of the gut that was/were sampled. | array | no |  | Radial tissue term | EPI, LP, MLN, MUILF, MUSC, PP, SMILF, SUB | EPI; LP; MLN; MUILF; MUSC; PP; SMILF; SUB
 transplant_organ | Was the specimen collected after extraction for organ transplantation? | boolean | no |  | Transplant organ |  | yes; no
 diseases | Short description of known disease(s) of the specimen. | array | no | [See module  disease_ontology](module.md#disease-ontology) | Known disease(s) |  | 
 adjacent_diseases | Short description of the disease(s) adjacent to the specimen's collection site (e.g. breast cancer). | array | no | [See module  disease_ontology](module.md#disease-ontology) | Adjacent disease(s) |  | 

json_schema/type/biomaterial/specimen_from_organism.json

@@ -67,19 +67,22 @@
         },
         "radial_tissue_term": {
             "description": "Layer(s) of the gut that was/were sampled.",
-            "example": "EPI; LP; MUSC; SUB; MLN",
+            "example": "EPI; LP; MLN; MUILF; MUSC; PP; SMILF; SUB",
             "type": "array",
             "items": {
                 "type": "string",
                 "enum": [
                     "EPI",
                     "LP",
                     "MLN",
+                    "MUILF",
                     "MUSC",
+                    "PP",
+                    "SMILF",
                     "SUB"
                 ]
             },
-            "guidelines": "Should be one of: EPI (epithelium), LP (lamina propria), MUSC (muscularis), SUB (submucosa), MLN (mesenteric lymph node).",
+            "guidelines": "Should be one of: EPI (epithelium), LP (lamina propria), MUSC (muscularis), SUB (submucosa), MLN (mesenteric lymph node), Peyer's patch (PP), Mucosal lymphoid follicle (MUILF), Submucosal lymphoid follicle (SMILF).",
             "user_friendly": "Radial tissue term",
             "bionetworks": ["gut"]
         },

json_schema/versions.json

@@ -1,5 +1,5 @@
 {
-    "last_update_date": "2026-02-09T12:55:32Z",
+    "last_update_date": "2026-02-09T15:53:55Z",
     "version_numbers": {
         "core": {
             "biomaterial": {
@@ -101,7 +101,7 @@
                 "donor_organism": "18.3.4",
                 "imaged_specimen": "3.5.0",
                 "organoid": "11.5.0",
-                "specimen_from_organism": "11.1.0"
+                "specimen_from_organism": "11.1.1"
             },
             "file": {
                 "analysis_file": "8.0.0",