MH reports that putting images from J-SENSE recon code output
https://sigpy.readthedocs.io/en/latest/generated/sigpy.mri.app.JsenseRecon.html#sigpy.mri.app.JsenseRecon
into mri_field_map_reg.m causes amplification of pixels outside the head in this line:
|
[yik yi2] = mri_field_map_reg_scale(yik, etime, arg.fmax); |
|
function [yik yi2] = mri_field_map_reg_scale(yik, etime, fmax) |
Masking the fieldmaps (using ESPIRT masks) addressed the issue.
Fixing this is a low priority because I recommend using this code instead anyway:
https://github.com/ClaireYLin/regularized-field-map-estimation
MH reports that putting images from J-SENSE recon code output
https://sigpy.readthedocs.io/en/latest/generated/sigpy.mri.app.JsenseRecon.html#sigpy.mri.app.JsenseRecon
into
mri_field_map_reg.mcauses amplification of pixels outside the head in this line:mirt/mri/fieldmap/mri_field_map_reg.m
Line 96 in 43b20b5
mirt/mri/fieldmap/mri_field_map_reg.m
Line 148 in 43b20b5
Masking the fieldmaps (using ESPIRT masks) addressed the issue.
Fixing this is a low priority because I recommend using this code instead anyway:
https://github.com/ClaireYLin/regularized-field-map-estimation