PepSeqPred/.github/workflows/publish.yml at main · LadnerLab/PepSeqPred · GitHub

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name: Publish

on:
  push:
    tags:
      - "v*"

permissions:
  contents: read

jobs:
  test:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4

      - uses: actions/setup-python@v5
        with:
          python-version: "3.12"

      - name: Install deps
        run: |
          python -m pip install --upgrade pip
          pip install -e .[dev]

      - name: Lint
        run: ruff check src tests

      - name: Run tests
        run: pytest -m "unit or integration or e2e" --junitxml=pytest-all.xml

      - name: Upload test report
        if: always()
        uses: actions/upload-artifact@v4
        with:
          name: release-test-report
          path: pytest-all.xml

  build:
    needs: test
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4

      - uses: actions/setup-python@v5
        with:
          python-version: "3.12"

      - name: Build artifacts
        run: |
          python -m pip install --upgrade pip build twine
          python -m build
          python -m twine check dist/*

      - name: Upload dist
        uses: actions/upload-artifact@v4
        with:
          name: dist
          path: dist/*

  publish-testpypi:
    needs: build
    runs-on: ubuntu-latest
    environment: testpypi
    permissions:
      id-token: write
      contents: read
    steps:
      - uses: actions/download-artifact@v4
        with:
          name: dist
          path: dist

      - uses: pypa/gh-action-pypi-publish@release/v1
        with:
          repository-url: https://test.pypi.org/legacy/

  publish-pypi:
    needs: publish-testpypi
    runs-on: ubuntu-latest
    environment: pypi
    permissions:
      id-token: write
      contents: read
    steps:
      - uses: actions/download-artifact@v4
        with:
          name: dist
          path: dist

      - uses: pypa/gh-action-pypi-publish@release/v1