Possible breakout sessions

[ml-evs]

• Best practices for semantic annotation [breakout: Wednesday 14:00] (@samikanza)
  • Pragmatic first steps and plateaux for linking data
  • Peer review of show-and-tell of current approach going from free text, structure, semantics, linked data ecosystem for given domain
• datatractor: registering extractors from e.g., PSDI, PSI, NOMAD [breakout: Wednesday 16:30] (@PeterKraus / @ml-evs)
• instrument control [breakout: Wednesday 11:00]
• OO-LD/ELNFileFormat/RO-Crate+
  • Semantic "standards", choosing/mapping ontologies for generic concepts e.g., processes

Breakouts

Time	Topic	Place	Thought leader
Weds 11:30	Best practices for semantic annotations	-	@samikanza
Weds 14:00	Instrument control with FAIR/semantic software	-	@PeterKraus
Weds 14:00	Semantic Workflows	-	@edan-bainglass
Weds 15:00	Request/Response Profiles	-	@edan-bainglass
Weds 16:30	datatractor/metadata extractors	-	@ml-evs
Weds 16:30	Semantics & ELNs	-	@edan-bainglass
Thu 11:00	Guidance for getting started with RO-Crate	-	@samikanza
Thu 11:00	Semantikon in AiiDA	-	@edan-bainglass
Thu 12:30	RO-Crate mechanics	-	@edan-bainglass
Thu 14:00	RO-Crate adopition	-	@edan-bainglass
Thu 14:00	-	-
Thu 16:30	FINALES + PWD	-	@edan-bainglass

[davidelbert]

Semantic Annotation Breakout: Attached here is a recent paper reviewing Materials Science and Engineering ontologies. I have no relationship to this work and have not evaluated how comprehensive it is but it is a big list!
landscape of ontologies review paper 2408.06034v1.pdf

[samikanza]

Semantic Annotation Breakout:
— How to semantically annotate (ontologies/formats) [and parse the data] / How do we select ontologies?
— How do we automate semantic tagging? (Technologies, and techniques)
— Semantic tagging in ELNs (ELN ontologies, and describing ELN data semantically for interoperability)

Google Doc - https://docs.google.com/document/d/1nuS2RosdZRkhy5dyqUQN3Deepz4Eia4a0RdycgGOGLI/edit?usp=sharing

[samikanza]

Ro-Crate and Semantic Annotation - https://docs.google.com/document/d/1UcWtroKSf8UlplPtJLzfKuSpXG8hugRgv1zErQkfoLM/edit?tab=t.0