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nHackelnHackel
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Update CI for individual package testing combinations (#249)
Add isolated and directory-changes triggered tests for subpackages
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Lines changed: 450 additions & 3 deletions

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‎.github/workflows/ci.yml‎

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name: CI
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name: MRIReco_All
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on:
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pull_request:
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branches:
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- master
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- '*'
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tags: '*'
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jobs:
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test:
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jobs:
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test_all_latest:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
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runs-on: ${{ matrix.os }}
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strategy:

‎.github/workflows/ci_mribase.yml‎

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name: MRIBase
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on:
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pull_request:
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branches:
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- master
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paths:
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- 'MRIBase/**'
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push:
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branches:
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- master
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- '*'
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tags: '*'
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paths:
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- 'MRIBase/**'
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jobs:
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test:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
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runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
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matrix:
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version:
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- '1' # Leave this line unchanged. '1' will automatically expand to the latest stable 1.x release of Julia.
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- '1.10' #LTS
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#- 'nightly'
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os:
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- ubuntu-latest
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- macos-latest
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- windows-latest
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arch:
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- x64
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steps:
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- uses: actions/checkout@v3
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- uses: julia-actions/setup-julia@v1
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with:
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version: ${{ matrix.version }}
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arch: ${{ matrix.arch }}
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- uses: actions/cache@v3
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env:
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cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
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restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- name: Install MRIBase
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.develop([PackageSpec(path=pwd(), subdir="MRIBase")])
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- uses: julia-actions/julia-buildpkg@v1
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- name: Run MRIBase tests
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.test("MRIBase")
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: MRIBase/src
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- uses: codecov/codecov-action@v4.4.0
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with:
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token: ${{ secrets.CODECOV_TOKEN }}

‎.github/workflows/ci_mricoilsens.yml‎

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name: MRICoilSensitivities
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on:
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pull_request:
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branches:
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- master
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paths:
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- 'MRICoilSensitivities/**'
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push:
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branches:
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- master
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- '*'
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tags: '*'
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paths:
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- 'MRICoilSensitivities/**'
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jobs:
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test:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
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runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
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matrix:
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version:
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- '1' # Leave this line unchanged. '1' will automatically expand to the latest stable 1.x release of Julia.
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- '1.10' #LTS
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#- 'nightly'
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os:
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- ubuntu-latest
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- macos-latest
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- windows-latest
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arch:
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- x64
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steps:
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- uses: actions/checkout@v3
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- uses: julia-actions/setup-julia@v1
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with:
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version: ${{ matrix.version }}
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arch: ${{ matrix.arch }}
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- uses: actions/cache@v3
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env:
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cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
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restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- name: Install MRICoilSensitivities
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.develop([PackageSpec(path=pwd(), subdir="MRICoilSensitivities")])
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- uses: julia-actions/julia-buildpkg@v1
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- name: Run MRICoilSensitivities tests
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.test("MRICoilSensitivities")
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: MRICoilSensitivities/src
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- uses: codecov/codecov-action@v4.4.0
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with:
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token: ${{ secrets.CODECOV_TOKEN }}

‎.github/workflows/ci_mrifiles.yml‎

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name: MRIFiles
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on:
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pull_request:
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branches:
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- master
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paths:
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- 'MRIFiles/**'
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push:
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branches:
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- master
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- '*'
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tags: '*'
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paths:
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- 'MRIFiles/**'
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jobs:
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test:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
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runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
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matrix:
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version:
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- '1' # Leave this line unchanged. '1' will automatically expand to the latest stable 1.x release of Julia.
25+
- '1.10' #LTS
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#- 'nightly'
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os:
28+
- ubuntu-latest
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- macos-latest
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- windows-latest
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arch:
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- x64
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steps:
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- uses: actions/checkout@v3
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- uses: julia-actions/setup-julia@v1
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with:
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version: ${{ matrix.version }}
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arch: ${{ matrix.arch }}
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- uses: actions/cache@v3
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env:
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cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
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restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- name: Install MRIFiles
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.develop([PackageSpec(path=pwd(), subdir="MRIFiles")])
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- uses: julia-actions/julia-buildpkg@v1
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- name: Run subpackage tests
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.test("MRIFiles")
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: MRIFiles/src
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- uses: codecov/codecov-action@v4.4.0
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with:
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token: ${{ secrets.CODECOV_TOKEN }}

‎.github/workflows/ci_mrioperators.yml‎

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name: MRIOperators
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on:
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pull_request:
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branches:
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- master
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paths:
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- 'MRIOperators/**'
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push:
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branches:
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- master
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- '*'
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tags: '*'
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paths:
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- 'MRIOperators/**'
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jobs:
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test:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
18+
runs-on: ${{ matrix.os }}
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strategy:
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fail-fast: false
21+
matrix:
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version:
23+
- '1' # Leave this line unchanged. '1' will automatically expand to the latest stable 1.x release of Julia.
24+
- '1.10' #LTS
25+
#- 'nightly'
26+
os:
27+
- ubuntu-latest
28+
- macos-latest
29+
- windows-latest
30+
arch:
31+
- x64
32+
steps:
33+
- uses: actions/checkout@v3
34+
- uses: julia-actions/setup-julia@v1
35+
with:
36+
version: ${{ matrix.version }}
37+
arch: ${{ matrix.arch }}
38+
- uses: actions/cache@v3
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env:
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cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
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restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- name: Install MRIOperators
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.develop([PackageSpec(path=pwd(), subdir="MRIOperators")])
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# Hack, MRIOperators tests depend on MRISimulation
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# And MRISimulation depends on MRIOperators
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# Can't checkout out latest release if compat breaks
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Pkg.develop([PackageSpec(path=pwd(), subdir="MRISimulation")])
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- uses: julia-actions/julia-buildpkg@v1
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- name: Run MRIOperators tests
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shell: julia --color=yes --project=. {0}
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run: |
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using Pkg
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Pkg.test("MRIOperators")
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- uses: julia-actions/julia-processcoverage@v1
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with:
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directories: MRIOperators/src
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- uses: codecov/codecov-action@v4.4.0
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with:
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token: ${{ secrets.CODECOV_TOKEN }}

‎.github/workflows/ci_mrireco.yml‎

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name: MRIReco
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on:
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pull_request:
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branches:
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- master
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paths:
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- 'ext/**'
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- 'src/**'
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push:
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branches:
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- master
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- '*'
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tags: '*'
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paths:
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- 'ext/**'
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- 'src/**'
17+
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jobs:
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test:
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name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
21+
runs-on: ${{ matrix.os }}
22+
strategy:
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fail-fast: false
24+
matrix:
25+
version:
26+
- '1.10'
27+
- '1'
28+
os:
29+
- ubuntu-latest
30+
- macOS-latest
31+
- windows-latest
32+
arch:
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- x64
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steps:
35+
- uses: actions/checkout@v3
36+
- uses: julia-actions/setup-julia@v1
37+
with:
38+
version: ${{ matrix.version }}
39+
arch: ${{ matrix.arch }}
40+
- uses: actions/cache@v3
41+
env:
42+
cache-name: cache-artifacts
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with:
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path: ~/.julia/artifacts
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key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
46+
restore-keys: |
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${{ runner.os }}-test-${{ env.cache-name }}-
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${{ runner.os }}-test-
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${{ runner.os }}-
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- uses: julia-actions/julia-buildpkg@v1
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- uses: julia-actions/julia-runtest@v1
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continue-on-error: ${{ matrix.version == 'nightly' }}
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- uses: julia-actions/julia-processcoverage@v1
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- uses: codecov/codecov-action@v3
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with:
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file: lcov.info

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