Merge pull request #239 from MiraGeoscience/GEOPY-2274

GEOPY-2274: update scikit-learn to >=1.5.0 addressing potential vulnerability

Author: domfournier

environments/py-3.10-linux-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 0f54a26695792bef9ae71d11e72896171987869d09020c611e73c9a0622596d6
+# input_hash: 7b2bb2835665234d0ef442f0e4a4c9717b61f9a50ae298c50cf9cae2e9369ece
 
 channels:
   - conda-forge
@@ -15,7 +15,7 @@ dependencies:
   - argon2-cffi-bindings=21.2.0=py310ha75aee5_5
   - arrow=1.3.0=pyhd8ed1ab_1
   - asciitree=0.3.3=py_2
-  - astroid=3.3.10=py310hff52083_0
+  - astroid=3.3.11=py310hff52083_0
   - asttokens=3.0.0=pyhd8ed1ab_1
   - async-lru=2.0.5=pyh29332c3_0
   - attrs=25.3.0=pyh71513ae_0
@@ -29,10 +29,10 @@ dependencies:
   - brotli-python=1.1.0=py310hf71b8c6_3
   - bzip2=1.0.8=h4bc722e_7
   - c-ares=1.34.5=hb9d3cd8_0
-  - ca-certificates=2025.7.9=hbd8a1cb_0
+  - ca-certificates=2025.7.14=hbd8a1cb_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
-  - certifi=2025.7.9=pyhd8ed1ab_0
+  - certifi=2025.7.14=pyhd8ed1ab_0
   - cffi=1.17.1=py310h8deb56e_0
   - charset-normalizer=3.4.2=pyhd8ed1ab_0
   - click=8.2.1=pyh707e725_0
@@ -58,7 +58,7 @@ dependencies:
   - fonttools=4.58.5=py310h89163eb_0
   - fqdn=1.5.1=pyhd8ed1ab_1
   - freetype=2.13.3=ha770c72_1
-  - fsspec=2025.5.1=pyhd8ed1ab_0
+  - fsspec=2025.7.0=pyhd8ed1ab_0
   - geoana=0.7.2=py310ha2bacc8_0
   - greenlet=3.2.3=py310hf71b8c6_0
   - h11=0.16.0=pyhd8ed1ab_0
@@ -129,7 +129,7 @@ dependencies:
   - libgcc-ng=15.1.0=h69a702a_3
   - libgfortran=15.1.0=h69a702a_3
   - libgfortran5=15.1.0=hcea5267_3
-  - libhwloc=2.11.2=default_h0d58e46_1001
+  - libhwloc=2.11.2=default_h3d81e11_1002
   - libiconv=1.18=h4ce23a2_1
   - libjpeg-turbo=3.1.0=hb9d3cd8_0
   - liblapack=3.9.0=32_hc41d3b0_mkl
@@ -152,7 +152,7 @@ dependencies:
   - libxml2=2.13.8=h4bc477f_0
   - libzlib=1.3.1=hb9d3cd8_2
   - linkify-it-py=2.0.3=pyhd8ed1ab_1
-  - llvm-openmp=20.1.7=h024ca30_0
+  - llvm-openmp=20.1.8=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=2.2.0=pyhd8ed1ab_0
   - markupsafe=3.0.2=py310h89163eb_1
@@ -168,7 +168,7 @@ dependencies:
   - mumps-include=5.7.3=h82cca05_10
   - mumps-seq=5.7.3=h06cbf8f_10
   - munkres=1.1.4=pyhd8ed1ab_1
-  - myst-nb=1.2.0=pyh29332c3_0
+  - myst-nb=1.3.0=pyhe01879c_0
   - myst-parser=1.0.0=pyhd8ed1ab_0
   - nbclient=0.10.2=pyhd8ed1ab_0
   - nbconvert=7.16.6=hb482800_0
@@ -235,7 +235,7 @@ dependencies:
   - rfc3986-validator=0.1.1=pyh9f0ad1d_0
   - rpds-py=0.26.0=py310hbcd0ec0_0
   - rtree=1.2.0=py310haf1e407_1
-  - scikit-learn=1.4.2=py310h981052a_1
+  - scikit-learn=1.5.2=py310h27f47ee_1
   - scipy=1.14.1=py310hfcf56fc_2
   - send2trash=1.8.3=pyh0d859eb_1
   - setuptools=80.9.0=pyhff2d567_0
@@ -305,11 +305,11 @@ dependencies:
   - zstandard=0.23.0=py310ha75aee5_2
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-      - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
-      - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@87f68c3a25cb3fac2a4c9de8c0d74ec4e58d0963
-      - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
-      - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
-      - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a7a5280079f39ca35c502bddedb56ccc3f77f29d
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
+    - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
+    - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-linux-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 0f54a26695792bef9ae71d11e72896171987869d09020c611e73c9a0622596d6
+# input_hash: 7b2bb2835665234d0ef442f0e4a4c9717b61f9a50ae298c50cf9cae2e9369ece
 
 channels:
   - conda-forge
@@ -15,10 +15,10 @@ dependencies:
   - brotli-python=1.1.0=py310hf71b8c6_3
   - bzip2=1.0.8=h4bc722e_7
   - c-ares=1.34.5=hb9d3cd8_0
-  - ca-certificates=2025.7.9=hbd8a1cb_0
+  - ca-certificates=2025.7.14=hbd8a1cb_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
-  - certifi=2025.7.9=pyhd8ed1ab_0
+  - certifi=2025.7.14=pyhd8ed1ab_0
   - cffi=1.17.1=py310h8deb56e_0
   - click=8.2.1=pyh707e725_0
   - cloudpickle=3.1.1=pyhd8ed1ab_0
@@ -32,7 +32,7 @@ dependencies:
   - fasteners=0.19=pyhd8ed1ab_1
   - fonttools=4.58.5=py310h89163eb_0
   - freetype=2.13.3=ha770c72_1
-  - fsspec=2025.5.1=pyhd8ed1ab_0
+  - fsspec=2025.7.0=pyhd8ed1ab_0
   - geoana=0.7.2=py310ha2bacc8_0
   - h2=4.2.0=pyhd8ed1ab_0
   - h5py=3.14.0=nompi_py310hea1e86d_100
@@ -68,7 +68,7 @@ dependencies:
   - libgcc-ng=15.1.0=h69a702a_3
   - libgfortran=15.1.0=h69a702a_3
   - libgfortran5=15.1.0=hcea5267_3
-  - libhwloc=2.11.2=default_h0d58e46_1001
+  - libhwloc=2.11.2=default_h3d81e11_1002
   - libiconv=1.18=h4ce23a2_1
   - libjpeg-turbo=3.1.0=hb9d3cd8_0
   - liblapack=3.9.0=32_hc41d3b0_mkl
@@ -89,7 +89,7 @@ dependencies:
   - libxcrypt=4.4.36=hd590300_1
   - libxml2=2.13.8=h4bc477f_0
   - libzlib=1.3.1=hb9d3cd8_2
-  - llvm-openmp=20.1.7=h024ca30_0
+  - llvm-openmp=20.1.8=h4922eb0_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.2=py310h89163eb_1
   - matplotlib-base=3.8.4=py310hef631a5_2
@@ -127,7 +127,7 @@ dependencies:
   - pyyaml=6.0.2=py310h89163eb_2
   - readline=8.2=h8c095d6_2
   - rtree=1.2.0=py310haf1e407_1
-  - scikit-learn=1.4.2=py310h981052a_1
+  - scikit-learn=1.5.2=py310h27f47ee_1
   - scipy=1.14.1=py310hfcf56fc_2
   - setuptools=80.9.0=pyhff2d567_0
   - six=1.17.0=pyhd8ed1ab_0
@@ -157,11 +157,11 @@ dependencies:
   - zstandard=0.23.0=py310ha75aee5_2
   - zstd=1.5.7=hb8e6e7a_2
   - pip:
-      - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
-      - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@87f68c3a25cb3fac2a4c9de8c0d74ec4e58d0963
-      - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
-      - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
-      - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a7a5280079f39ca35c502bddedb56ccc3f77f29d
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
+    - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
+    - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64-dev.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: fe9bea64dc53fd535084a0a107d7688e8632e51eeb8084b72468b0a651a364b6
+# input_hash: 12cc832b6afad224ba7a18f42ebe117e16cedc70424e95b2c7e3894be647d2bf
 
 channels:
   - conda-forge
@@ -15,7 +15,7 @@ dependencies:
   - argon2-cffi-bindings=21.2.0=py310ha8f682b_5
   - arrow=1.3.0=pyhd8ed1ab_1
   - asciitree=0.3.3=py_2
-  - astroid=3.3.10=py310h5588dad_0
+  - astroid=3.3.11=py310h5588dad_0
   - asttokens=3.0.0=pyhd8ed1ab_1
   - async-lru=2.0.5=pyh29332c3_0
   - attrs=25.3.0=pyh71513ae_0
@@ -28,10 +28,10 @@ dependencies:
   - brotli-bin=1.1.0=h2466b09_3
   - brotli-python=1.1.0=py310h9e98ed7_3
   - bzip2=1.0.8=h2466b09_7
-  - ca-certificates=2025.7.9=h4c7d964_0
+  - ca-certificates=2025.7.14=h4c7d964_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
-  - certifi=2025.7.9=pyhd8ed1ab_0
+  - certifi=2025.7.14=pyhd8ed1ab_0
   - cffi=1.17.1=py310ha8f682b_0
   - charset-normalizer=3.4.2=pyhd8ed1ab_0
   - click=8.2.1=pyh7428d3b_0
@@ -58,7 +58,7 @@ dependencies:
   - fonttools=4.58.5=py310hdb0e946_0
   - fqdn=1.5.1=pyhd8ed1ab_1
   - freetype=2.13.3=h57928b3_1
-  - fsspec=2025.5.1=pyhd8ed1ab_0
+  - fsspec=2025.7.0=pyhd8ed1ab_0
   - geoana=0.7.2=py310h3e8ed56_0
   - greenlet=3.2.3=py310h9e98ed7_0
   - h11=0.16.0=pyhd8ed1ab_0
@@ -123,7 +123,7 @@ dependencies:
   - libfreetype6=2.13.3=h0b5ce68_1
   - libgcc=15.1.0=h1383e82_3
   - libgomp=15.1.0=h1383e82_3
-  - libhwloc=2.11.2=default_ha69328c_1001
+  - libhwloc=2.11.2=default_h88281d1_1002
   - libiconv=1.18=h135ad9c_1
   - libjpeg-turbo=3.1.0=h2466b09_0
   - liblapack=3.9.0=32_h1aa476e_mkl
@@ -140,7 +140,7 @@ dependencies:
   - libxml2=2.13.8=h442d1da_0
   - libzlib=1.3.1=h2466b09_2
   - linkify-it-py=2.0.3=pyhd8ed1ab_1
-  - llvm-openmp=20.1.7=h30eaf37_0
+  - llvm-openmp=20.1.8=hfa2b4ca_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markdown-it-py=2.2.0=pyhd8ed1ab_0
   - markupsafe=3.0.2=py310h38315fa_1
@@ -154,7 +154,7 @@ dependencies:
   - msgpack-python=1.1.1=py310hc19bc0b_0
   - mumps-seq=5.7.3=hbaa6519_10
   - munkres=1.1.4=pyhd8ed1ab_1
-  - myst-nb=1.2.0=pyh29332c3_0
+  - myst-nb=1.3.0=pyhe01879c_0
   - myst-parser=1.0.0=pyhd8ed1ab_0
   - nbclient=0.10.2=pyhd8ed1ab_0
   - nbconvert=7.16.6=hb482800_0
@@ -208,7 +208,7 @@ dependencies:
   - python-tzdata=2025.2=pyhd8ed1ab_0
   - python_abi=3.10=7_cp310
   - pytz=2025.2=pyhd8ed1ab_0
-  - pywin32=307=py310h9e98ed7_3
+  - pywin32=311=py310h282bd7d_0
   - pywinpty=2.0.15=py310h9e98ed7_0
   - pyyaml=6.0.2=py310h38315fa_2
   - pyzmq=27.0.0=py310h656833d_0
@@ -219,7 +219,7 @@ dependencies:
   - rfc3986-validator=0.1.1=pyh9f0ad1d_0
   - rpds-py=0.26.0=py310h034784e_0
   - rtree=1.2.0=py310h08d5ad2_1
-  - scikit-learn=1.4.2=py310hf2a6c47_1
+  - scikit-learn=1.5.2=py310hf2a6c47_1
   - scipy=1.14.1=py310hbd0dde3_2
   - send2trash=1.8.3=pyh5737063_1
   - setuptools=80.9.0=pyhff2d567_0
@@ -295,11 +295,11 @@ dependencies:
   - zstandard=0.23.0=py310ha8f682b_2
   - zstd=1.5.7=hbeecb71_2
   - pip:
-      - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
-      - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@87f68c3a25cb3fac2a4c9de8c0d74ec4e58d0963
-      - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
-      - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
-      - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a7a5280079f39ca35c502bddedb56ccc3f77f29d
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
+    - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
+    - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
 
 variables:
   KMP_WARNINGS: 0

environments/py-3.10-win-64.conda.lock.yml

@@ -1,6 +1,6 @@
 # Generated by conda-lock.
 # platform: win-64
-# input_hash: fe9bea64dc53fd535084a0a107d7688e8632e51eeb8084b72468b0a651a364b6
+# input_hash: 12cc832b6afad224ba7a18f42ebe117e16cedc70424e95b2c7e3894be647d2bf
 
 channels:
   - conda-forge
@@ -14,10 +14,10 @@ dependencies:
   - brotli-bin=1.1.0=h2466b09_3
   - brotli-python=1.1.0=py310h9e98ed7_3
   - bzip2=1.0.8=h2466b09_7
-  - ca-certificates=2025.7.9=h4c7d964_0
+  - ca-certificates=2025.7.14=h4c7d964_0
   - cached-property=1.5.2=hd8ed1ab_1
   - cached_property=1.5.2=pyha770c72_1
-  - certifi=2025.7.9=pyhd8ed1ab_0
+  - certifi=2025.7.14=pyhd8ed1ab_0
   - cffi=1.17.1=py310ha8f682b_0
   - click=8.2.1=pyh7428d3b_0
   - cloudpickle=3.1.1=pyhd8ed1ab_0
@@ -31,7 +31,7 @@ dependencies:
   - fasteners=0.19=pyhd8ed1ab_1
   - fonttools=4.58.5=py310hdb0e946_0
   - freetype=2.13.3=h57928b3_1
-  - fsspec=2025.5.1=pyhd8ed1ab_0
+  - fsspec=2025.7.0=pyhd8ed1ab_0
   - geoana=0.7.2=py310h3e8ed56_0
   - h2=4.2.0=pyhd8ed1ab_0
   - h5py=3.14.0=nompi_py310h877c39c_100
@@ -61,7 +61,7 @@ dependencies:
   - libfreetype6=2.13.3=h0b5ce68_1
   - libgcc=15.1.0=h1383e82_3
   - libgomp=15.1.0=h1383e82_3
-  - libhwloc=2.11.2=default_ha69328c_1001
+  - libhwloc=2.11.2=default_h88281d1_1002
   - libiconv=1.18=h135ad9c_1
   - libjpeg-turbo=3.1.0=h2466b09_0
   - liblapack=3.9.0=32_h1aa476e_mkl
@@ -76,7 +76,7 @@ dependencies:
   - libxcb=1.17.0=h0e4246c_0
   - libxml2=2.13.8=h442d1da_0
   - libzlib=1.3.1=h2466b09_2
-  - llvm-openmp=20.1.7=h30eaf37_0
+  - llvm-openmp=20.1.8=hfa2b4ca_0
   - locket=1.0.0=pyhd8ed1ab_0
   - markupsafe=3.0.2=py310h38315fa_1
   - matplotlib-base=3.8.4=py310hadb10a8_2
@@ -110,7 +110,7 @@ dependencies:
   - pytz=2025.2=pyhd8ed1ab_0
   - pyyaml=6.0.2=py310h38315fa_2
   - rtree=1.2.0=py310h08d5ad2_1
-  - scikit-learn=1.4.2=py310hf2a6c47_1
+  - scikit-learn=1.5.2=py310hf2a6c47_1
   - scipy=1.14.1=py310hbd0dde3_2
   - setuptools=80.9.0=pyhff2d567_0
   - six=1.17.0=pyhd8ed1ab_0
@@ -145,11 +145,11 @@ dependencies:
   - zstandard=0.23.0=py310ha8f682b_2
   - zstd=1.5.7=hbeecb71_2
   - pip:
-      - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
-      - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@87f68c3a25cb3fac2a4c9de8c0d74ec4e58d0963
-      - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
-      - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
-      - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
+    - geoapps-utils @ git+https://github.com/MiraGeoscience/geoapps-utils.git@c64e2db54bfdacc19ef675a7d54288aaad8b78a8
+    - geoh5py @ git+https://github.com/MiraGeoscience/geoh5py.git@a7a5280079f39ca35c502bddedb56ccc3f77f29d
+    - mira-simpeg @ git+https://github.com/MiraGeoscience/simpeg.git@86e22e6fa457859d494d94552e6431728e513d7a
+    - octree-creation-app @ git+https://github.com/MiraGeoscience/octree-creation-app.git@02fbd85bf7d54b8f4336f1f0094c1c3e27714e81
+    - param-sweeps @ git+https://github.com/MiraGeoscience/param-sweeps.git@9ed6091534d638171957a17324e1a1e8f067b434
 
 variables:
   KMP_WARNINGS: 0