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fix(biomark): cant find duckdb file
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Lines changed: 3 additions & 1 deletion

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src/datasync/pit_registering_salmon.py

Lines changed: 3 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -459,7 +459,9 @@ def replicate(
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)
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if not Path(duckdb_path).exists():
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raise typer.BadParameter(f"Error: DuckDB file not found at {duckdb_path}")
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raise typer.BadParameter(
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f"Error: DuckDB file not found at {Path(duckdb_path).resolve()}"
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)
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# only include configs for enabled data types that have data
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stream_configs = {}

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