change to yesterday instead

Author: taheeraahmed

src/datasync/pit_registering_salmon.py

@@ -179,12 +179,6 @@ def biomark_pit_salmon(
         paginator=SinglePagePaginator(),
     )
 
-    # set default dates if not provided
-    if begin_date is None or end_date is None:
-        log.info("Start date or end date is None, setting to yesterday")
-        begin_date = (datetime.today() - timedelta(days=1)).strftime("%Y-%m-%d")
-        end_date = datetime.today().strftime("%Y-%m-%d")
-
     try:
         if tags:
             tags_resource = dlt.resource(
@@ -237,7 +231,7 @@ def run(
         False, help="Download data from all accessible locations"
     ),
     base_url: str = BIOMARK_BASE_URL,
-    today: bool = typer.Option(False, help="Set date range to today only"),
+    yesterday: bool = typer.Option(False, help="Set date range to yesterday only"),
     dataset_name: str = BIOMARK_DATASET_NAME,
 ):
     """Download PIT data from BioMark's API to a .duckdb file."""
@@ -255,10 +249,10 @@ def run(
             "--tags, --readers, or --environment"
         )
 
-    if today:
-        begin_date = (datetime.today() - timedelta(days=1)).strftime("%Y-%m-%d")
-        end_date = datetime.today().strftime("%Y-%m-%d")
-        log.info("Setting date range to today", date=begin_date)
+    if yesterday:
+        begin_date = (datetime.today() - timedelta(days=2)).strftime("%Y-%m-%d")
+        end_date = (datetime.today() - timedelta(days=1)).strftime("%Y-%m-%d")
+        log.info("Setting date range to yesterday", date=begin_date)
 
     if all_locations:
         # skip 'vatne' (0NO) as it returns 403 Forbidden