build: remove deprecated Make aliases

Signed-off-by: Aaron Gonzales <aagonzales@nvidia.com>

Author: binaryaaron

DEVELOPMENT.md

@@ -70,7 +70,7 @@ mise run convert-notebooks      # regenerate tutorial notebooks
 Dependency-install tasks use `uv sync --locked` and fail when `uv.lock` does not match the project metadata. After
 changing dependencies in `pyproject.toml`, run `uv lock` before running the install tasks.
 
-The Makefile retains compatibility targets for existing scripts. New development commands belong in `.mise/tasks/`.
+The Makefile only exposes `help`, `install-mise`, and `setup`. Developer commands belong in `.mise/tasks/`.
 
 ## Validation Before Opening a PR
 

Makefile

@@ -1,8 +1,8 @@
 # SPDX-FileCopyrightText: Copyright (c) 2025-2026 NVIDIA CORPORATION & AFFILIATES. All rights reserved.
 # SPDX-License-Identifier: Apache-2.0
 
-# Compatibility entry points for contributors and scripts that still invoke
-# make. New commands belong in .mise/tasks/ and should run via `mise run`.
+# Mise discovery and bootstrap entry points.
+# Developer commands live in .mise/tasks/ and run via `mise run`.
 
 SHELL := /bin/bash
 export PATH := $(HOME)/.local/share/mise/shims:$(HOME)/.local/bin:$(PATH)
@@ -21,43 +21,3 @@ install-mise:
 setup: install-mise
 	@MISE_YES=1 mise trust
 	@MISE_YES=1 mise run setup
-
-.PHONY: run
-run:
-	@if [ -z "$(TASK)" ]; then \
-		echo "Error: missing TASK. Usage: make run TASK=test [ARGS='...']" >&2; \
-		exit 1; \
-	fi
-	@mise run "$(TASK)" $(ARGS)
-
-define deprecated_target
-.PHONY: $(1)
-$(1):
-	@printf '%s\n' 'deprecated; forwarding to `mise run $(2)`' >&2
-	@mise run $(2)
-endef
-
-$(eval $(call deprecated_target,bootstrap,bootstrap))
-$(eval $(call deprecated_target,install,install))
-$(eval $(call deprecated_target,install-dev,install-dev))
-$(eval $(call deprecated_target,install-dev-notebooks,install-dev-notebooks))
-$(eval $(call deprecated_target,install-pre-commit,install-pre-commit))
-$(eval $(call deprecated_target,format,format))
-$(eval $(call deprecated_target,format-check,format-check))
-$(eval $(call deprecated_target,typecheck,typecheck))
-$(eval $(call deprecated_target,copyright,copyright))
-$(eval $(call deprecated_target,copyright-check,copyright-check))
-$(eval $(call deprecated_target,check,check))
-$(eval $(call deprecated_target,lock-check,lock-check))
-$(eval $(call deprecated_target,test,test))
-$(eval $(call deprecated_target,test-e2e,test:e2e))
-$(eval $(call deprecated_target,coverage,coverage))
-$(eval $(call deprecated_target,build-wheel,build-wheel))
-$(eval $(call deprecated_target,publish-pypi,publish:pypi))
-$(eval $(call deprecated_target,install-dev-docs,install-dev-docs))
-$(eval $(call deprecated_target,docs-serve,docs:serve))
-$(eval $(call deprecated_target,docs-build,docs:build))
-$(eval $(call deprecated_target,convert-notebooks,convert-notebooks))
-$(eval $(call deprecated_target,clean-pycache,clean-pycache))
-$(eval $(call deprecated_target,clean,clean))
-$(eval $(call deprecated_target,clean-merged-branches,clean-merged-branches))

README.md

@@ -156,7 +156,8 @@ anonymizer --help         # CLI usage
 mise run install-pre-commit  # Install pre-commit hooks
 ```
 
-Run `mise tasks` to list the available developer commands. Tasks live in `.mise/tasks/` and are used by CI. The Makefile retains deprecated compatibility aliases for existing scripts.
+Run `mise tasks` to list the available developer commands. Tasks live in `.mise/tasks/` and are used by CI. The
+Makefile only exposes `help`, `install-mise`, and `setup`; run developer commands with Mise.
 
 ### Local endpoint credentials
 

tests/tools/test_mise_configuration.py

@@ -30,6 +30,14 @@ def test_local_mise_installer_keeps_unsigned_fallback_opt_in() -> None:
     assert 'REQUIRE_SIGNED_INSTALL="${MISE_REQUIRE_SIGNED_INSTALL:-0}"' in installer
 
 
+def test_makefile_exposes_bootstrap_without_deprecated_task_aliases() -> None:
+    makefile = (REPO_ROOT / "Makefile").read_text(encoding="utf-8")
+    phony_targets = [line.removeprefix(".PHONY: ") for line in makefile.splitlines() if line.startswith(".PHONY: ")]
+
+    assert phony_targets == ["help", "install-mise", "setup"]
+    assert "deprecated_target" not in makefile
+
+
 def test_mise_typecheck_preserves_blocking_repository_contract() -> None:
     quality_tasks = _read_toml(REPO_ROOT / ".mise/tasks/quality.toml")
     typecheck = quality_tasks["typecheck"]