C++ API

Refactor and optimize alignment and density map code #158

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Run time

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Job	Run time
cpp_api (ubuntu-24.04)	12m 50s
cpp_api (ubuntu-22.04)	7m 52s
cpp_api_dev (ubuntu-22.04)	1m 14s
cpp_api (macos-14)	8m 43s
cpp_api_dev (ubuntu-24.04)	2m 18s
cpp_api (windows-2022)	8m 58s
cpp_api (macos-15)	6m 57s
	48m 52s