fix stddef.h path

Author: jeanwsr

.github/workflows/conda.yml

@@ -62,7 +62,7 @@ jobs:
           deb http://archive.debian.org/debian-security buster/updates main contrib non-free
           EOF
           apt-get update
-          apt-get install -y git make libclang-dev
+          apt-get install -y git make
       - name: Set up Miniconda
         uses: conda-incubator/setup-miniconda@v3
         with:
@@ -105,7 +105,7 @@ jobs:
           deb http://archive.debian.org/debian-security buster/updates main contrib non-free
           EOF
           apt-get update
-          apt-get install -y git make libclang-dev
+          apt-get install -y git make
       - name: Set up Miniconda
         uses: conda-incubator/setup-miniconda@v3
         with:

recipe/meta.yaml

@@ -40,7 +40,7 @@ source:
     folder: rest_regression
 
 build:
-  number: 4
+  number: 5
   # Uncomment the following line if the package is pure Python and the recipe is exactly the same for all platforms.
   # It is okay if the dependencies are not built for all platforms/versions, although selectors are still not allowed.
   # See https://conda-forge.org/docs/maintainer/knowledge_base.html#noarch-python for more details.
@@ -67,10 +67,11 @@ build:
     export REST_FORTRAN_COMPILER=$F90
     echo RESTFORT${REST_FORTRAN_COMPILER}
     export LIBCLANG_PATH="$BUILD_PREFIX/lib"
-    export CFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${CONDA_BUILD_SYSROOT}/usr/include"
-    export CXXFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${CONDA_BUILD_SYSROOT}/usr/include"
+    export GCC_INCLUDE="${BUILD_PREFIX}/lib/gcc/*/*/include/"
+    export CFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
+    export CXXFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
     export RUSTFLAGS="-C link-args=--sysroot=${CONDA_BUILD_SYSROOT}"
-    export BINDGEN_EXTRA_CLANG_ARGS="--sysroot=$CONDA_BUILD_SYSROOT -I${CONDA_BUILD_SYSROOT}/usr/include"
+    export BINDGEN_EXTRA_CLANG_ARGS="--sysroot=$CONDA_BUILD_SYSROOT -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
     # cargo build --release --verbose --target=x86_64-unknown-linux-gnu
     cargo install --path . --profile release --root ${PREFIX}
     mkdir -p ${PREFIX}/share/rest/

recipe_oldkern/meta.yaml

@@ -66,10 +66,12 @@ build:
     # export REST_HOME=".."
     export REST_FORTRAN_COMPILER=$F90
     echo RESTFORT${REST_FORTRAN_COMPILER}
-    export CFLAGS="--sysroot=${CONDA_BUILD_SYSROOT}"
-    export CXXFLAGS="--sysroot=${CONDA_BUILD_SYSROOT}"
+    export LIBCLANG_PATH="$BUILD_PREFIX/lib"
+    export GCC_INCLUDE="${BUILD_PREFIX}/lib/gcc/*/*/include/"
+    export CFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
+    export CXXFLAGS="--sysroot=${CONDA_BUILD_SYSROOT} -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
     export RUSTFLAGS="-C link-args=--sysroot=${CONDA_BUILD_SYSROOT}"
-    export BINDGEN_EXTRA_CLANG_ARGS="--sysroot=$CONDA_BUILD_SYSROOT"
+    export BINDGEN_EXTRA_CLANG_ARGS="--sysroot=$CONDA_BUILD_SYSROOT -I${GCC_INCLUDE} -I${CONDA_BUILD_SYSROOT}/usr/include"
     # cargo build --release --verbose --target=x86_64-unknown-linux-gnu
     cargo install --path . --profile release --root ${PREFIX}
     mkdir -p ${PREFIX}/share/rest/
@@ -89,6 +91,7 @@ requirements:
     # this is necessary for all compiled recipes
     # - {{ stdlib('c') }}
     - {{ compiler('rust') }}
+    - libclang
     - hdf5
     - libcint
     - openblas * openmp*