open-data-registry/datasets/bps_microscopy.yaml at main · UCR-Robotics/open-data-registry · GitHub

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Name: Biological and Physical Sciences (BPS) Microscopy Benchmark Training Dataset
Description: Fluorescence microscopy images of individual nuclei from mouse fibroblast cells, irradiated with Fe particles or X-rays with fluorescent foci indicating 53BP1 positivity, a marker of DNA damage. These are maximum intensity projections of 9-layer microscopy Z-stacks.
Documentation: https://docs.google.com/document/d/e/2PACX-1vTIjUPenLxVX0stErsBbK884QMJW_Ur1mqHJ9K3KIZl3klT90cxHDppsEvz5Z6Skdu13X8tzghqyWcN/pub
Contact: lauren.m.sanders@nasa.gov
ManagedBy: "[NASA](https://osdr.nasa.gov/)"
UpdateFrequency: New fluorescence microscopy mouse fibroblast nuclei data is added whenever it is available.
Tags:
  - aws-pds
  - fluorescence imaging
  - genetic
  - genetic maps
  - microscopy
  - GeneLab
  - NASA SMD AI
License: There are no restrictions on the use of this data.
Resources:
  - Description: NASA BPS Microscopy Benchmark Training Data
    ARN: arn:aws:s3:::nasa-bps-training-data/Microscopy/
    Region: us-west-2
    Type: S3 Bucket
    Explore:
DataAtWork:
  Publications:
  - Title: NASA SMD AI Workshop Report
    URL: https://science.nasa.gov/files/atoms/files/NASA%20SMD%20AI%20Workshop%2021%20(spreads)%20(1).pdf
    AuthorName: SMD Artificial Intelligence (AI) Initiative
  - Title: Dose, LET and Strain Dependence of Radiation-Induced 53BP1 Foci in 15 Mouse Strains Ex Vivo Introducing Novel DNA Damage Metrics
    URL: https://doi.org/10.1667/RR15338.1
    AuthorName: Sébastien Penninckx, Egle Cekanaviciute, Charlotte Degorre, Elodie Guiet, Louise Viger, Stéphane Lucasb, Sylvain V. Costes