Merge pull request #65 from UniMainzGeo/PBC

This is LaMEM version 3.0.0!
Among other things it includes the following list of key changes:
• Hybrid multigrid preconditioner framework (assembled/matrix-free)
• Matrix-free Jacobian operator
• Improved 2D multigrid coarsening (for quasi 2D setups)
• Block direct solver
• Periodic boundary conditions (mechanical and thermal)
• wBFBT preconditioner (Rudi at al, 2017)
• Automated solver options and stop tolerances

Author: sgeotech

.github/workflows/CI.yml

@@ -110,11 +110,11 @@ jobs:
       - name: Install dependencies 1
         run: sudo apt-get update && sudo apt-get install -y xorg-dev mesa-utils xvfb libgl1 freeglut3-dev libxrandr-dev libxinerama-dev libxcursor-dev libxi-dev libxext-dev        
       - name: Install dependencies 2
-        run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
+        run: julia --project=doc/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
       - name: Build and deploy
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # For authentication with GitHub Actions token
           DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} # For authentication with SSH deploy key
         run: DISPLAY=:0 xvfb-run -s '-screen 0 1024x768x24' 
-             julia --project=docs/ docs/make.jl
+             julia --project=doc/ doc/make.jl
 

AUTHORS

@@ -24,3 +24,4 @@ Dave May
 Garrett Apuzen-Ito
 Jana Schierjott
 Sam Howell
+Wenrong Cao

CITATION.cff

@@ -5,14 +5,15 @@ message: >-
   metadata from this file.
 type: software
 authors:
-  - given-names: Anton
+  - given-names: Anton A.
     family-names: Popov
+    orcid: 'https://orcid.org/0000-0002-8075-8406'
     affiliation: Johannes Gutenberg University Mainz
-  - given-names: Boris
+  - given-names: Boris J.P.
     family-names: Kaus
     orcid: 'https://orcid.org/0000-0002-0247-8660'
     affiliation: Johannes Gutenberg University Mainz
 keywords:
   - computational geosciences
   - high-performance computing
-license: GPL-3.0
+license: MIT

CONTRIBUTING.md

@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) 2011-2023 JGU Mainz, Boris Kaus, Anton Popov
+Copyright (c) 2011-2026 JGU Mainz, Boris Kaus, Anton Popov
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

LICENSE

@@ -1,7 +1,7 @@
 name = "LaMEM_C"
 uuid = "29b6043d-3311-4c16-b469-b02bf85cb680"
 authors = ["Anton Popov <popov@uni-mainz.de>", "Boris Kaus <kaus@uni-mainz.de>"]
-version = "2.2.1"
+version = "3.0.0"
 
 [deps]
 DelimitedFiles = "8bb1440f-4735-579b-a4ab-409b98df4dab"

Project.toml

@@ -15,7 +15,7 @@ quasi-Newton solvers (provided through the PETSc interface).
 
 LaMEM has been tested on a variety of machines ranging from laptops to a massively parallel cluster with 458'752 cores.
 
- ![Getting Started](./docs/src/assets/img/LaMEM_overview.png)
+ ![Getting Started](./doc/src/assets/img/LaMEM_overview.png)
 
 ## Getting started