Update runCLAM_git.sh

zj-zhang · web-flow · commit b4d55ccb7de1 · 2016-11-02T22:36:53.000-07:00
diff --git a/runCLAM_git.sh b/runCLAM_git.sh
@@ -14,7 +14,8 @@
 #$ -M your@email.com
 #
 
-script_dir="./CLAM/bin"
+# change the script dir to your own if necessary
+script_dir="./"  
 
 echo "bamfile: $1"
 echo "output folder: $2"

Original file line number	Diff line number	Diff line change
`@@ -14,7 +14,8 @@`
`14`	`14`	`#$ -M your@email.com`
`15`	`15`	`#`
`16`	`16`
`17`		`-script_dir="./CLAM/bin"`
	`17`	`+# change the script dir to your own if necessary`
	`18`	`+script_dir="./"`
`18`	`19`
`19`	`20`	`echo "bamfile: $1"`
`20`	`21`	`echo "output folder: $2"`