feat: unlink resolved reified definitions and drop Class#definitionXl

Author: maboukerfa

lib/ontologies_linked_data/config/config.rb

@@ -198,7 +198,6 @@ def goo_namespaces
       conf.add_namespace(:cclicense, RDF::Vocabulary.new("http://creativecommons.org/licenses/"))
       conf.add_namespace(:nkos, RDF::Vocabulary.new("http://w3id.org/nkos#"))
       conf.add_namespace(:skosxl, RDF::Vocabulary.new("http://www.w3.org/2008/05/skos-xl#"))
-      conf.add_namespace(:vocbench, RDF::Vocabulary.new("http://art.uniroma2.it/ontologies/vocbench#"))
       conf.add_namespace(:dcterms, RDF::Vocabulary.new("http://purl.org/dc/terms/"))
       conf.add_namespace(:uneskos, RDF::Vocabulary.new("http://purl.org/umu/uneskos#"))
 

lib/ontologies_linked_data/models/class.rb

@@ -92,12 +92,12 @@ def self.urn_id(acronym,classId)
       # Hypermedia settings
       embed :children, :ancestors, :descendants, :parents, :prefLabelXl, :altLabelXl, :hiddenLabelXl
       serialize_default :prefLabel, :synonym, :definition, :cui, :semanticType, :obsolete, :matchType, :ontologyType, :provisional, :created, :modified, :memberOf, :inScheme # an attribute used in Search (not shown out of context)
-      serialize_methods :properties, :childrenCount, :hasChildren, :definitionXl
+      serialize_methods :properties, :childrenCount, :hasChildren
       serialize_never :submissionAcronym, :submissionId, :submission, :descendants
       aggregates childrenCount: [:count, :children]
       links_load submission: [ontology: [:acronym]]
       do_not_load :descendants, :ancestors
-      prevent_serialize_when_nested :properties, :parents, :children, :ancestors, :descendants, :memberOf, :definitionXl
+      prevent_serialize_when_nested :properties, :parents, :children, :ancestors, :descendants, :memberOf
       link_to LinkedData::Hypermedia::Link.new("self", lambda {|s| "ontologies/#{s.submission.ontology.acronym}/classes/#{CGI.escape(s.id.to_s)}"}, self.uri_type),
               LinkedData::Hypermedia::Link.new("ontology", lambda {|s| "ontologies/#{s.submission.ontology.acronym}"}, Goo.vocabulary["Ontology"]),
               LinkedData::Hypermedia::Link.new("children", lambda {|s| "ontologies/#{s.submission.ontology.acronym}/classes/#{CGI.escape(s.id.to_s)}/children"}, self.uri_type),
@@ -386,20 +386,6 @@ def properties(*args)
         properties
       end
 
-      # Expose the content of reified skos:definition nodes (text + provenance).
-      # `definition` (the flat attribute) is unchanged: for reified definitions
-      # its entries are the bare node URIs; this method resolves those URIs into
-      # structured objects. Plain-literal definitions have no URI entries, so
-      # this returns an empty array and the flat `definition` still carries them.
-      def definitionXl
-        self.bring(:definition) if self.bring?(:definition)
-        uris = Array(self.definition).select { |d| d.is_a?(RDF::URI) }
-        return [] if uris.empty?
-
-        self.bring(:submission) if self.bring?(:submission)
-        LinkedData::Models::SKOS::Definition.reified(uris, self.submission)
-      end
-
       def self.partially_load_children(models, threshold, submission)
         ld = [:prefLabel, :definition, :synonym]
         ld << :subClassOf if submission.hasOntologyLanguage.obo?

lib/ontologies_linked_data/models/mod/semantic_artefact.rb

@@ -3,7 +3,6 @@
 require 'ontologies_linked_data/models/skos/scheme'
 require 'ontologies_linked_data/models/skos/collection'
 require 'ontologies_linked_data/models/skos/skosxl'
-require 'ontologies_linked_data/models/skos/definition'
 
 
 module LinkedData

lib/ontologies_linked_data/models/ontology.rb

@@ -9,7 +9,6 @@
 require 'ontologies_linked_data/models/skos/scheme'
 require 'ontologies_linked_data/models/skos/collection'
 require 'ontologies_linked_data/models/skos/skosxl'
-require 'ontologies_linked_data/models/skos/definition'
 require 'ontologies_linked_data/models/notes/note'
 require 'ontologies_linked_data/purl/purl_client'