We read every piece of feedback, and take your input very seriously.
To see all available qualifiers, see our documentation.
There was an error while loading. Please reload this page.
1 parent 36ee5ce commit 1205210Copy full SHA for 1205210
1 file changed
HISTORY.md
@@ -1,11 +1,8 @@
1
## 1.1.9 (in progress)
2
- Fix for get VEP cache.
3
- Support Picard's new syntax for ReorderSam (REFERENCE -> SEQUENCE_DICTIONARY).
4
-- Adds filtering of nucleosome free (NF) regions for ATAC-seq.
5
-- Add peak calling on NF regions.
6
-- Add uploading of full and NF BAM for ATAC-seq.
7
-- Add documentation describing ATAC-seq outputs.
8
- Remove mitochondrial reads from ChIP/ATAC-seq calling.
+- Add documentation describing ATAC-seq outputs.
9
- Add ENCODE library complexity metrics for ATAC/ChIP-seq to MultiQC report
10
(see https://www.encodeproject.org/data-standards/terms/#library for a description of the metrics)
11
- Add STAR sample-specific 2-pass. This helps assign a moderate number of reads per genes. Thanks
0 commit comments