Merge pull request #599 from broadinstitute/dp-vadr

dpark01 · web-flow · commit 1b71a94ed066 · 2025-08-19T14:12:46.000-04:00
bump vadr docker 1.6.3 to 1.6.4 model-free
diff --git a/pipes/WDL/tasks/tasks_ncbi.wdl b/pipes/WDL/tasks/tasks_ncbi.wdl
@@ -1521,7 +1521,7 @@ task vadr {
     String? vadr_model_tar_subdir
 
     String out_basename = basename(genome_fasta, '.fasta')
-    String docker = "quay.io/staphb/vadr:1.6.3"
+    String docker = "mirror.gcr.io/staphb/vadr:1.6.4"
     Int    mem_size = 16  # the RSV model in particular seems to consume 15GB RAM
     Int    cpus = 4
   }

Original file line number	Diff line number	Diff line change
`@@ -1521,7 +1521,7 @@ task vadr {`
`1521`	`1521`	`String? vadr_model_tar_subdir`
`1522`	`1522`
`1523`	`1523`	`String out_basename = basename(genome_fasta, '.fasta')`
`1524`		`- String docker = "quay.io/staphb/vadr:1.6.3"`
	`1524`	`+ String docker = "mirror.gcr.io/staphb/vadr:1.6.4"`
`1525`	`1525`	`Int mem_size = 16 # the RSV model in particular seems to consume 15GB RAM`
`1526`	`1526`	`Int cpus = 4`
`1527`	`1527`	`}`