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Releases: cctbx/cctbx_project

2025.8

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@bkpoon bkpoon released this 01 Sep 19:28

Release Notes

  • Added function to find similar ligands via SMILES with RCSB web services
  • Improvements to ligand validation tool (work in progress)
  • Initial integration of aspherical structure factors from DiSCaMB

Checksums

SHA256

af10a618c858162609827203c70cbf6167156771250dc9b23ee529cdba6bea70  cctbx-2025.8.tar.gz
1ff006b3e58570d1cc37611fcc29bc0ca95ab3f812815e8bd127a62e24a74e46  chem_data-2025.8-pyhe0d8492_0.conda

2025.7

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@bkpoon bkpoon released this 02 Aug 22:59

Release Notes

  • Added _atom_site.auth_atom_id to mmCIF output
  • Added calculation of a variable resolution map
  • CCTBParser: updated --diff-params to report any incompatible PHIL as unused

Checksums

SHA256

05dc073224ca3ef4e41acf575a2c1a6fd7b157a6c56540bcdf5aec5aa7ccf0e2  cctbx-2025.7.tar.gz
2f55c95fc15ecfed3a5deabd691538f7e4faf9c847ad2b282f0819285f14153a  chem_data-2025.7-pyh5490a37_0.conda

2025.6

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@bkpoon bkpoon released this 02 Jul 02:04

Release Notes

  • Added ability to remove bonds in geometry restraints manager
  • Added forward compatible PDB format for iotbx.cif_as_pdb
  • Improved tool for fixing CaBLAM outliers

Checksums

SHA256

df0a515c00a2726d028c55f613ce81fac6c1904f00928324b4984d893a14a584  cctbx-2025.6.tar.gz
b0009b0c2b2f9edfdcf065be3981d83cf5c795115cf0d893465e1985ee922fbf  chem_data-2025.6-pyh19cb8ea_0.conda

2025.5

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@bkpoon bkpoon released this 01 Jun 02:10

Release Notes

  • Added parameter for user restraints to pdb_interpretation
  • Improved barbed wire analysis, including JSON output
  • Improved consistency of handling models with hybrid36

Checksums

SHA256

c4fe8f8be5bb984146520b1c285a913ed0f21beab003ad6e79a3f6b9ac2b84c6  cctbx-2025.5.tar.gz
ea308e5ea8c6759e72df078dc998ab9fa595205167cd545edfde212c91264e75  chem_data-2025.5-pyh66f2a00_0.conda

2025.4

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@bkpoon bkpoon released this 01 May 23:01

Release Notes

  • Improved mmCIF compatibility across programs
  • Updated amino acid residue parentage
  • Updated map preparation so both half-maps and full-maps can be used

Checksums

SHA256

513fae67333f89794f0875d31a64b6394e9e456b954dff2baedde931c22a46a4  chem_data-2025.4-pyh66f2a00_0.conda
bf6e27315f6860e42574aaa46d99438b6a831b6a85668de628279e169148bac4  cctbx-2025.4.tar.gz

2025.3

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@bkpoon bkpoon released this 02 Apr 00:17
  • Improved mmCIF compatibility across programs
  • Added more intrinsic functions to fable
  • CCTBXParser: show PHIL parameters in default help output

2025.2

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@bkpoon bkpoon released this 01 Mar 16:09
  • Add peak search to map manager
  • Add water renumbering to pdbtools
  • Update FSC calculation to use different binning
  • Add more searches for RCSB search API
  • CCTBXParser: --diff-params flag can proceed with non-local files
  • DataManager: fix bug where the default type for Miller arrays may not update correctly

2025.1

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@bkpoon bkpoon released this 01 Feb 01:02
  • Improvements to probe2
  • Fix bug where the scattering table was not kept after selecting in xray_structure
  • Update for changes in RCSB web API

2024.12

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@bkpoon bkpoon released this 31 Dec 11:39
  • Added consistency checks for map_model_manager
  • Added tool for finding reference models based on sequence identity

2024.11

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@bkpoon bkpoon released this 02 Dec 18:40
  • Added generalized interface for LBFGS minimizer
  • Improved adding of hydrogens near links in Reduce2