marimba/pyproject.toml at main · csiro-fair/marimba · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
[project]
name = "marimba"
version = "1.2.0"
description = "A Python framework for structuring, processing, packaging and distributing FAIR scientific image datasets"
authors = [
    { name = "Chris Jackett", email = "chris.jackett@csiro.au" },
    { name = "Kevin Barnard", email = "kbarnard@mbari.org" },
]
requires-python = ">=3.12,<3.15"
readme = "README.md"
license = {file = "LICENSE"}
dependencies = [
    "typer>=0.16.0,<0.27",
    "rich>=14.1.0,<16",
    "PyYAML~=6.0",
    "ifdo>=1.6.0,<2",
    "pillow>=12.1.1,<13",
    "opencv-python-headless>=4.11.0,<5",
    "gitpython>=3.1.45,<4",
    "boto3>=1.40.6,<2",
    "staticmap>=0.5.7,<0.6",
    "PyExifTool>=0.5.6,<1",
    "tabulate>=0.9.0,<0.11",
    "av>=16.1.0,<18",
    # numpy upper-bound tracks opencv-python-headless ABI compat; opencv 4.13 is verified against numpy 2.4. Bump deliberately when opencv builds against the next numpy minor.
    "numpy>=2.2.5,<2.6.0",
    # botocore is technically a boto3 transitive, but s3.py imports botocore.exceptions.ClientError directly, so we
    # pin it explicitly to keep deptry happy and lock the version we're testing against.
    "botocore>=1.40.6,<2",
    "requests>=2.32.4,<3",
    "psutil>=7.0.0,<8",
]
keywords = [
    "FAIR", "scientific-data", "image-processing", "marine-science",
    "metadata", "iFDO", "dataset", "pipeline", "ocean-imaging",
]
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "Intended Audience :: Science/Research",
    "Natural Language :: English",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3 :: Only",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: 3.14",
    "Topic :: Scientific/Engineering :: Image Processing",
    "Topic :: Scientific/Engineering :: Information Analysis",
    "Topic :: Software Development :: Libraries :: Python Modules",
    "License :: Other/Proprietary License",
]

[project.scripts]
marimba = "marimba.main:marimba_cli"

[project.urls]
"Homepage" = "https://github.com/csiro-fair/marimba"
"Documentation" = "https://github.com/csiro-fair/marimba/tree/main/docs"
"Bug Tracker" = "https://github.com/csiro-fair/marimba/issues"
"Changelog" = "https://github.com/csiro-fair/marimba/blob/main/CHANGELOG.md"
"Source" = "https://github.com/csiro-fair/marimba"

[dependency-groups]
dev = [
    # Core Project Management
    "hatch>=1.14.1,<2",

    # Formatting & Linting
    "black>=26.3.1,<27",
    "ruff>=0.12.8,<0.16",

    # Static Type Checking
    "mypy>=1.17.1,<3",
    "types-pyyaml>=6.0.12.20240311,<7",
    "types-tabulate>=0.9.0.20240106,<0.11",
    "types-requests>=2.32.0.20240622,<3",

    # Testing
    "pytest>=9.0.3,<10",
    "pytest-cov>=6.2.1,<8",
    "pytest-mock>=3.15.0,<4",

    # Code & Dependency Analysis
    "bandit>=1.7.8,<2",
    "deptry>=0.23.0",
    "vulture>=2.14.0,<3",

    # Git Hooks & Automation
    "pre-commit>=4.3.0,<5",

    # Packaging & Publishing
    "twine>=6.1.0,<7",
]

[tool.black]
line-length = 120
target-version = ['py312']
include = '\.pyi?$'
exclude = '''
/(
    \.git
  | \.mypy_cache
  | \.env
  | \.venv
  | build
  | dist
  | temp
)/
'''

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.hatch.build.targets.wheel]
packages = ["marimba"]

[tool.hatch.build.targets.wheel.force-include]
"marimba/py.typed" = "marimba/py.typed"

[tool.deptry.package_module_name_map]
pillow = ["PIL"]
PyYAML = ["yaml"]
gitpython = ["git"]
opencv-python-headless = ["cv2"]
PyExifTool = ["exiftool"]