chore(release): 0.1.5 — concurrent gnomad_get_variant batch dispatch

cyanheads · cyanheads · commit 8915ccc334cf · 2026-06-30T18:11:44.000-07:00
diff --git a/.claude-plugin/plugin.json b/.claude-plugin/plugin.json
@@ -1,6 +1,6 @@
 {
   "name": "gnomad-genetics-mcp-server",
-  "version": "0.1.4",
+  "version": "0.1.5",
   "description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in.",
   "author": {
     "name": "Casey Hand",
diff --git a/.codex-plugin/plugin.json b/.codex-plugin/plugin.json
@@ -1,6 +1,6 @@
 {
   "name": "gnomad-genetics-mcp-server",
-  "version": "0.1.4",
+  "version": "0.1.5",
   "description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in.",
   "author": {
     "name": "Casey Hand",
diff --git a/AGENTS.md b/AGENTS.md
@@ -1,7 +1,7 @@
 # Developer Protocol
 
 **Server:** gnomad-genetics-mcp-server
-**Version:** 0.1.4
+**Version:** 0.1.5
 **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.10`
 **Engines:** Bun ≥1.3.0, Node ≥24.0.0
 **MCP SDK:** `@modelcontextprotocol/sdk` ^1.29.0
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -2,6 +2,10 @@
 
 All notable changes to this project. Each entry links to its full per-version file in [changelog/](changelog/).
 
+## [0.1.5](changelog/0.1.x/0.1.5.md) — 2026-06-30
+
+gnomad_get_variant batch lookups now dispatch concurrently under the existing GNOMAD_MAX_CONCURRENCY cap instead of a serial loop; per-item partial success and stable input-order found[]/failed[] are unchanged, with no schema change.
+
 ## [0.1.4](changelog/0.1.x/0.1.4.md) — 2026-06-30 · 🛡️ Security
 
 Two fixes plus a security-bearing framework bump: gnomad_get_coverage bounds region coverage to the requested span (no more padded-window leakage); gnomad_search_clinvar names the cause for Ensembl gene IDs instead of a bare empty result; and adopting @cyanheads/mcp-ts-core ^0.10.10 re-resolves the transitive js-yaml, clearing GHSA-h67p-54hq-rp68.
diff --git a/CLAUDE.md b/CLAUDE.md
@@ -1,7 +1,7 @@
 # Developer Protocol
 
 **Server:** gnomad-genetics-mcp-server
-**Version:** 0.1.4
+**Version:** 0.1.5
 **Framework:** [@cyanheads/mcp-ts-core](https://www.npmjs.com/package/@cyanheads/mcp-ts-core) `^0.10.10`
 **Engines:** Bun ≥1.3.0, Node ≥24.0.0
 **MCP SDK:** `@modelcontextprotocol/sdk` ^1.29.0
diff --git a/README.md b/README.md
@@ -7,7 +7,7 @@
 
 <div align="center">
 
-[![Version](https://img.shields.io/badge/Version-0.1.4-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/gnomad-genetics-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/gnomad-genetics-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/gnomad-genetics-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.0-blueviolet.svg?style=flat-square)](https://bun.sh/)
+[![Version](https://img.shields.io/badge/Version-0.1.5-blue.svg?style=flat-square)](./CHANGELOG.md) [![License](https://img.shields.io/badge/License-Apache%202.0-orange.svg?style=flat-square)](./LICENSE) [![Docker](https://img.shields.io/badge/Docker-ghcr.io-2496ED?style=flat-square&logo=docker&logoColor=white)](https://github.com/users/cyanheads/packages/container/package/gnomad-genetics-mcp-server) [![MCP SDK](https://img.shields.io/badge/MCP%20SDK-^1.29.0-green.svg?style=flat-square)](https://modelcontextprotocol.io/) [![npm](https://img.shields.io/npm/v/@cyanheads/gnomad-genetics-mcp-server?style=flat-square&logo=npm&logoColor=white)](https://www.npmjs.com/package/@cyanheads/gnomad-genetics-mcp-server) [![TypeScript](https://img.shields.io/badge/TypeScript-^6.0.3-3178C6.svg?style=flat-square)](https://www.typescriptlang.org/) [![Bun](https://img.shields.io/badge/Bun-v1.3.0-blueviolet.svg?style=flat-square)](https://bun.sh/)
 
 </div>
 
diff --git a/changelog/0.1.x/0.1.5.md b/changelog/0.1.x/0.1.5.md
@@ -0,0 +1,10 @@
+---
+summary: "gnomad_get_variant batch lookups now dispatch concurrently under the existing GNOMAD_MAX_CONCURRENCY cap instead of a serial loop; per-item partial success and stable input-order found[]/failed[] are unchanged, with no schema change."
+security: false
+---
+
+# 0.1.5 — 2026-06-30
+
+## Changed
+
+- **`gnomad_get_variant`** — batch lookups now dispatch concurrently instead of iterating a serial `for` loop. The existing `GnomadService` concurrency semaphore (`GNOMAD_MAX_CONCURRENCY`, default 2), acquired per upstream GraphQL call, still bounds the fan-out, so a multi-ID batch overlaps its upstream requests under the cap rather than running them strictly one at a time. Per-item partial success is unchanged — a malformed or absent ID still lands in `failed[]` without failing the others — and `found[]`/`failed[]` stay in input order regardless of upstream resolution order. No input or output schema change. [#10](https://github.com/cyanheads/gnomad-genetics-mcp-server/issues/10)
diff --git a/manifest.json b/manifest.json
@@ -1,7 +1,7 @@
 {
   "manifest_version": "0.3",
   "name": "gnomad-genetics-mcp-server",
-  "version": "0.1.4",
+  "version": "0.1.5",
   "description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in.",
   "author": {
     "name": "Casey Hand",
diff --git a/package.json b/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@cyanheads/gnomad-genetics-mcp-server",
-  "version": "0.1.4",
+  "version": "0.1.5",
   "mcpName": "io.github.cyanheads/gnomad-genetics-mcp-server",
   "description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in — via MCP. STDIO or Streamable HTTP.",
   "type": "module",
diff --git a/server.json b/server.json
@@ -6,14 +6,14 @@
     "url": "https://github.com/cyanheads/gnomad-genetics-mcp-server",
     "source": "github"
   },
-  "version": "0.1.4",
+  "version": "0.1.5",
   "packages": [
     {
       "registryType": "npm",
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/gnomad-genetics-mcp-server",
       "runtimeHint": "node",
-      "version": "0.1.4",
+      "version": "0.1.5",
       "packageArguments": [
         {
           "type": "positional",
@@ -42,7 +42,7 @@
       "registryBaseUrl": "https://registry.npmjs.org",
       "identifier": "@cyanheads/gnomad-genetics-mcp-server",
       "runtimeHint": "node",
-      "version": "0.1.4",
+      "version": "0.1.5",
       "packageArguments": [
         {
           "type": "positional",

Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`{`
`2`	`2`	`"name": "gnomad-genetics-mcp-server",`
`3`		`- "version": "0.1.4",`
	`3`	`+ "version": "0.1.5",`
`4`	`4`	`"description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in.",`
`5`	`5`	`"author": {`
`6`	`6`	`"name": "Casey Hand",`
Original file line number	Diff line number	Diff line change
`@@ -1,7 +1,7 @@`
`1`	`1`	`{`
`2`	`2`	`"manifest_version": "0.3",`
`3`	`3`	`"name": "gnomad-genetics-mcp-server",`
`4`		`- "version": "0.1.4",`
	`4`	`+ "version": "0.1.5",`
`5`	`5`	`"description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in.",`
`6`	`6`	`"author": {`
`7`	`7`	`"name": "Casey Hand",`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`{`
`2`	`2`	`"name": "@cyanheads/gnomad-genetics-mcp-server",`
`3`		`- "version": "0.1.4",`
	`3`	`+ "version": "0.1.5",`
`4`	`4`	`"mcpName": "io.github.cyanheads/gnomad-genetics-mcp-server",`
`5`	`5`	`"description": "Look up variant allele frequencies by ancestry, gene loss-of-function constraint, gene variant lists, and sequencing coverage over gnomAD — with ClinVar significance joined in — via MCP. STDIO or Streamable HTTP.",`
`6`	`6`	`"type": "module",`