Bump version.

Author: dcjones

CHANGES.md

@@ -1,4 +1,11 @@
 
+# 3.1.1
+  - Fix some inaccuracies in how posterior mean estimates are computed.
+  - Check that the output directory exists before running inference.
+  - Retain transcript quality values and output them with the transcript metadata.
+  - Fix a bug causing excessive memory usage when writing transcript metadata
+  - Set some additional metadata in the spatialdata geoparquet files
+
 # 3.1.0
   - Fix a significant bug in the factorization scheme which degraded segmentation quality on data with large gene panels.
   - Extensive optimization work leading to around 1.5x-4x faster run times and 5-10% less memory usage. Changes include:

Cargo.toml

@@ -1,7 +1,7 @@
 [package]
 name = "proseg"
 description = "Probabilistic cell segmentation for in situ spatial transcriptomics"
-version = "3.1.0"
+version = "3.1.1"
 rust-version = "1.88.0"
 edition = "2024"
 authors = ["Daniel C. Jones <djones3@fredhutch.org>"]