blastocystis/List genomes.txt at master · fbeghini/blastocystis · GitHub

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Full Genome
Cryptosporidium hominis 	G000006425
Cryptosporidium parvum 		G000165345 G000209695
Cyclospora cayetanensis		G000769155
Entamoeba dispar			folder
Giardia duodenalis			folder as Giardia intestinalis
Entamoeba histolytica		folder
Entamoeba nuttalli			folder
Blastocystis ST4			folder
Blastocystis ST7			folder

rRNA
Dientamoeba fragilis		16S-like 18S
Pentatrichomonas hominis	18S
Tetratrichomonas sp.		18S 28S 5.8S 16S-like
Enteromonas hominis			18S
Entamoeba dispar			18S	28S
Entamoeba polecki			18S 16S-like
Endolimax nana				16S-like
Sarcocystis hominis			18S
Chilomastix mesnili			18S 28S
Entamoeba moshkovskii		18S
Entamoeba coli				18S
Entameoba hartmanni			18S
Cystoisospora belli			18S
Cryptosporidium meleagridis	18S
Cryptosporidium canis 		18S
Cryptosporidium felis		18S
Cryptosporidium cuniculus	18S
Cryptosporidium viatorum	18S
Sarcocystis suihominis		18S
Balantidium coli			18S partial 5.8S partial

Niente
Retortomonas intestinalis
Trichomonas hominis
Iodamoeba butschli

LSU
SILVA_119_LSURef_tax_silva.fasta.gz

SSU
SILVA_119_SSURef_Nr99_tax_silva.fasta.gz