Skip to content

Commit 9eb3e4c

Browse files
committed
automated commit replacing obsolete ontology terms
1 parent 34c1912 commit 9eb3e4c

7 files changed

Lines changed: 58 additions & 28 deletions

File tree

models/MGI_MGI_1918000.ttl

Lines changed: 7 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -76,9 +76,10 @@ pav:providedBy a owl:AnnotationProperty .
7676

7777
gomodel:MGI_MGI_1918000
7878
a owl:Ontology ;
79+
rdfs:comment "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
7980
lego:modelstate "production" ;
8081
dc:contributor "https://orcid.org/0000-0003-2689-5511" ;
81-
dc:date "2009-12-15" ;
82+
dc:date "2026-07-30" ;
8283
dc:title "Kdsr (MGI:MGI:1918000)" ;
8384
dcterms:created "2009-12-15" ;
8485
dcterms:dateAccepted "2022-03-28" ;
@@ -90,6 +91,8 @@ lego:evidence a owl:AnnotationProperty .
9091

9192
dcterms:created a owl:AnnotationProperty .
9293

94+
obo:GO_0030148 a owl:Class .
95+
9396
:7c9da735-d508-4455-8ff7-13086466ae55
9497
a owl:NamedIndividual , obo:ECO_0000266 ;
9598
lego:evidence-with "UniProtKB:Q06136" ;
@@ -247,9 +250,10 @@ dc:date a owl:AnnotationProperty .
247250
pav:providedBy "http://informatics.jax.org" .
248251

249252
:1a666773-9949-47cc-a3c2-2591171a657d
250-
a owl:NamedIndividual , obo:GO_0006666 ;
253+
a owl:NamedIndividual , obo:GO_0030148 ;
254+
rdfs:comment "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
251255
dc:contributor "https://orcid.org/0000-0003-2689-5511" ;
252-
dc:date "2009-12-15" ;
256+
dc:date "2026-07-30" ;
253257
dcterms:created "2009-12-15" ;
254258
dcterms:dateAccepted "2022-03-28" ;
255259
pav:providedBy "http://informatics.jax.org" .

models/SGD_S000000469.ttl

Lines changed: 7 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -63,9 +63,10 @@
6363

6464
gomodel:SGD_S000000469
6565
a owl:Ontology ;
66+
rdfs:comment "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
6667
lego:modelstate "production" ;
6768
dc:contributor "https://orcid.org/0000-0002-1775-4998" , "https://orcid.org/0000-0002-3726-7441" , "https://orcid.org/0000-0002-7010-0264" , "https://orcid.org/0000-0002-8379-6600" , "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-9799-5523" ;
68-
dc:date "2018-11-20" ;
69+
dc:date "2026-07-30" ;
6970
dc:title "TSC10 (SGD:S000000469)" ;
7071
dcterms:created "2013-08-07" ;
7172
dcterms:dateAccepted "2024-02-01" ;
@@ -317,9 +318,10 @@ lego:evidence a owl:AnnotationProperty .
317318
pav:providedBy "http://www.yeastgenome.org" .
318319

319320
:5e414fdd-e342-4728-b87a-689a74c87f3d
320-
a owl:NamedIndividual , obo:GO_0006666 ;
321+
a owl:NamedIndividual , obo:GO_0030148 ;
322+
rdfs:comment "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
321323
dc:contributor "https://orcid.org/0000-0001-9043-693X" ;
322-
dc:date "2013-08-07" ;
324+
dc:date "2026-07-30" ;
323325
dcterms:created "2013-08-07" ;
324326
dcterms:dateAccepted "2024-02-01" ;
325327
pav:providedBy "http://www.yeastgenome.org" .
@@ -486,6 +488,8 @@ dc:contributor a owl:AnnotationProperty .
486488
dcterms:dateAccepted "2024-02-01" ;
487489
pav:providedBy "http://www.yeastgenome.org" .
488490

491+
obo:GO_0030148 a owl:Class .
492+
489493
:18b22474-82a4-4264-8f35-2e6b7fc22f71
490494
a owl:NamedIndividual , obo:ECO_0000314 ;
491495
dc:contributor "https://orcid.org/0000-0002-8379-6600" ;

models/SGD_S000001746.ttl

Lines changed: 10 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -172,6 +172,8 @@ pav:providedBy a owl:AnnotationProperty .
172172
dcterms:dateAccepted "2024-02-01" ;
173173
pav:providedBy "http://www.yeastgenome.org" .
174174

175+
obo:GO_0002949 a owl:Class .
176+
175177
[ a owl:Axiom ;
176178
rdfs:comment "SGD:S000001746 BFO:0000050 GO:0000408 PMID:16564010 ECO:0000314 2006-09-18 SGD id=GOA:2113667906|contributor-id=https://orcid.org/0000-0002-1775-4998|creation-date=2013-08-07T08:40:23|modification-date=2013-08-07T08:40:23" , "SGD:S000001746 BFO:0000050 GO:0000408 PMID:16874308 ECO:0000314 2006-09-18 SGD id=GOA:2113667899|contributor-id=https://orcid.org/0000-0002-1775-4998|creation-date=2013-08-07T08:40:23|modification-date=2013-08-07T08:40:23" ;
177179
lego:evidence :075ae19d-49c6-40db-a126-c6bf71ed97d4 ;
@@ -197,9 +199,10 @@ dcterms:created a owl:AnnotationProperty .
197199

198200
gomodel:SGD_S000001746
199201
a owl:Ontology ;
202+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
200203
lego:modelstate "production" ;
201204
dc:contributor "https://orcid.org/0000-0001-5472-917X" , "https://orcid.org/0000-0003-3166-4638" , "https://orcid.org/0000-0001-6749-615X" , "https://orcid.org/0000-0002-1775-4998" , "https://orcid.org/0000-0001-9043-693X" , "GOC:Julie_Park" ;
202-
dc:date "2023-07-12" ;
205+
dc:date "2026-07-30" ;
203206
dc:title "KAE1 (SGD:S000001746)" ;
204207
dcterms:created "2013-08-07" ;
205208
dcterms:dateAccepted "2024-02-01" ;
@@ -325,9 +328,10 @@ dc:source a owl:AnnotationProperty .
325328
] .
326329

327330
:ef51ae45-6ad3-4c22-a83e-8b08bfa67827
328-
a owl:NamedIndividual , obo:GO_0070525 ;
331+
a owl:NamedIndividual , obo:GO_0002949 ;
332+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
329333
dc:contributor "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-6749-615X" ;
330-
dc:date "2013-08-07" ;
334+
dc:date "2026-07-30" ;
331335
dcterms:created "2013-08-07" ;
332336
dcterms:dateAccepted "2024-02-01" ;
333337
pav:providedBy "http://www.yeastgenome.org" .
@@ -805,9 +809,10 @@ dc:contributor a owl:AnnotationProperty .
805809
] .
806810

807811
:ef51ae45-6ad3-4c22-a83e-8b08bfa67827-2
808-
a owl:NamedIndividual , obo:GO_0070525 ;
812+
a owl:NamedIndividual , obo:GO_0002949 ;
813+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
809814
dc:contributor "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-6749-615X" ;
810-
dc:date "2013-08-07" ;
815+
dc:date "2026-07-30" ;
811816
dcterms:created "2013-08-07" ;
812817
dcterms:dateAccepted "2024-02-01" ;
813818
pav:providedBy "http://www.yeastgenome.org" .

models/SGD_S000003137.ttl

Lines changed: 10 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -132,6 +132,8 @@ pav:providedBy a owl:AnnotationProperty .
132132
owl:annotatedTarget :2012d0a7-9979-4c5d-a503-0f2c329bc35b
133133
] .
134134

135+
obo:GO_0002949 a owl:Class .
136+
135137
[ a owl:Axiom ;
136138
rdfs:comment "SGD:S000003137 RO:0002331 GO:0006450 PMID:19884342 ECO:0000315 2010-11-29 SGD id=GOA:2113652917|contributor-id=https://orcid.org/0000-0001-8850-9925|creation-date=2013-08-07T08:39:10|modification-date=2013-08-07T08:39:10" ;
137139
lego:evidence :d60c77c2-9592-4a91-b1a5-5932bd20f4de ;
@@ -297,9 +299,10 @@ obo:RO_0002333 a owl:ObjectProperty .
297299
layout:y a owl:AnnotationProperty .
298300

299301
:b4ecd0b5-cf80-4601-b3ee-2b1eeae68e4b-2
300-
a owl:NamedIndividual , obo:GO_0070525 ;
302+
a owl:NamedIndividual , obo:GO_0002949 ;
303+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
301304
dc:contributor "https://orcid.org/0000-0001-9043-693X" ;
302-
dc:date "2013-08-07" ;
305+
dc:date "2026-07-30" ;
303306
dcterms:created "2013-08-07" ;
304307
dcterms:dateAccepted "2024-02-01" ;
305308
pav:providedBy "http://www.yeastgenome.org" .
@@ -427,9 +430,10 @@ obo:RO_0001025 a owl:ObjectProperty .
427430
pav:providedBy "http://www.yeastgenome.org" .
428431

429432
:b4ecd0b5-cf80-4601-b3ee-2b1eeae68e4b
430-
a owl:NamedIndividual , obo:GO_0070525 ;
433+
a owl:NamedIndividual , obo:GO_0002949 ;
434+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
431435
dc:contributor "https://orcid.org/0000-0001-9043-693X" ;
432-
dc:date "2013-08-07" ;
436+
dc:date "2026-07-30" ;
433437
dcterms:created "2013-08-07" ;
434438
dcterms:dateAccepted "2024-02-01" ;
435439
pav:providedBy "http://www.yeastgenome.org" .
@@ -444,9 +448,10 @@ obo:RO_0001025 a owl:ObjectProperty .
444448

445449
gomodel:SGD_S000003137
446450
a owl:Ontology ;
451+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
447452
lego:modelstate "production" ;
448453
dc:contributor "https://orcid.org/0000-0001-9799-5523" , "https://orcid.org/0000-0002-3726-7441" , "https://orcid.org/0000-0001-5472-917X" , "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0002-1775-4998" , "https://orcid.org/0000-0001-8850-9925" ;
449-
dc:date "2020-10-20" ;
454+
dc:date "2026-07-30" ;
450455
dc:title "SUA5 (SGD:S000003137)" ;
451456
dcterms:created "2013-08-07" ;
452457
dcterms:dateAccepted "2024-02-01" ;

models/SGD_S000003494.ttl

Lines changed: 7 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -248,6 +248,8 @@ pav:providedBy a owl:AnnotationProperty .
248248
dcterms:created "2013-08-07" ;
249249
pav:providedBy "http://www.yeastgenome.org" .
250250

251+
obo:GO_0002949 a owl:Class .
252+
251253
[ a owl:Axiom ;
252254
rdfs:comment "SGD:S000003494 RO:0002331 GO:0000723 PMID:16564010 ECO:0000316 SGD:S000002379 2006-08-29 SGD id=GOA:2113668956|contributor-id=https://orcid.org/0000-0002-1775-4998|creation-date=2013-08-07T08:40:24|modification-date=2013-08-07T08:40:24" , "SGD:S000003494 RO:0002331 GO:0000723 PMID:16564010 ECO:0000315 2006-08-29 SGD id=GOA:2113668967|contributor-id=https://orcid.org/0000-0002-1775-4998|creation-date=2013-08-07T08:40:24|modification-date=2013-08-07T08:40:24" ;
253255
lego:evidence :25c7daef-fc94-4206-af31-db2c8c0d36fb ;
@@ -506,9 +508,10 @@ layout:y a owl:AnnotationProperty .
506508

507509
gomodel:SGD_S000003494
508510
a owl:Ontology ;
511+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
509512
lego:modelstate "production" ;
510513
dc:contributor "https://orcid.org/0000-0001-7299-6685" , "https://orcid.org/0000-0002-3726-7441" , "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-5472-917X" , "https://orcid.org/0000-0002-1775-4998" ;
511-
dc:date "2021-06-18" ;
514+
dc:date "2026-07-30" ;
512515
dc:title "BUD32 (SGD:S000003494)" ;
513516
dcterms:created "2013-08-07" ;
514517
dcterms:dateAccepted "2024-02-01" ;
@@ -772,9 +775,10 @@ obo:RO_0001025 a owl:ObjectProperty .
772775
pav:providedBy "http://www.yeastgenome.org" .
773776

774777
:eaf2694d-b137-4216-8e42-764154ee98e4
775-
a owl:NamedIndividual , obo:GO_0070525 ;
778+
a owl:NamedIndividual , obo:GO_0002949 ;
779+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
776780
dc:contributor "https://orcid.org/0000-0001-9043-693X" ;
777-
dc:date "2013-08-07" ;
781+
dc:date "2026-07-30" ;
778782
dcterms:created "2013-08-07" ;
779783
dcterms:dateAccepted "2024-02-01" ;
780784
pav:providedBy "http://www.yeastgenome.org" .

models/SGD_S000007521.ttl

Lines changed: 7 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -254,9 +254,10 @@ obo:RO_0002233 a owl:ObjectProperty .
254254
pav:providedBy "http://www.yeastgenome.org" .
255255

256256
:c06a8249-761f-4967-8e91-d4e707068784
257-
a owl:NamedIndividual , obo:GO_0006666 ;
257+
a owl:NamedIndividual , obo:GO_0030148 ;
258+
rdfs:comment "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
258259
dc:contributor "https://orcid.org/0000-0002-7010-0264" , "https://orcid.org/0000-0001-6749-615X" ;
259-
dc:date "2019-03-01" ;
260+
dc:date "2026-07-30" ;
260261
dcterms:created "2013-08-07" ;
261262
dcterms:dateAccepted "2024-02-01" ;
262263
pav:providedBy "http://www.yeastgenome.org" .
@@ -376,10 +377,10 @@ dc:date a owl:AnnotationProperty .
376377

377378
gomodel:SGD_S000007521
378379
a owl:Ontology ;
379-
rdfs:comment "Automated change 2024-06-13: GO:0035339 replaced by GO:0017059" ;
380+
rdfs:comment "Automated change 2024-06-13: GO:0035339 replaced by GO:0017059" , "Automated change 2026-07-30: GO:0006666 replaced by GO:0030148" ;
380381
lego:modelstate "production" ;
381382
dc:contributor "https://orcid.org/0000-0003-4929-9472" , "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-5472-917X" , "https://orcid.org/0000-0001-6749-615X" , "https://orcid.org/0000-0002-7010-0264" , "https://orcid.org/0000-0002-3726-7441" ;
382-
dc:date "2024-06-13" ;
383+
dc:date "2026-07-30" ;
383384
dc:title "TSC3 (SGD:S000007521)" ;
384385
dcterms:created "2013-08-07" ;
385386
dcterms:dateAccepted "2024-02-01" ;
@@ -463,6 +464,8 @@ dc:contributor a owl:AnnotationProperty .
463464
dcterms:dateAccepted "2024-02-01" ;
464465
pav:providedBy "http://www.yeastgenome.org" .
465466

467+
obo:GO_0030148 a owl:Class .
468+
466469
:be88de69-eb02-497c-adff-b4f7b8465261
467470
a owl:NamedIndividual , obo:ECO_0000315 ;
468471
dc:contributor "https://orcid.org/0000-0002-3726-7441" ;

models/SGD_S000028512.ttl

Lines changed: 10 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -116,6 +116,8 @@ pav:providedBy a owl:AnnotationProperty .
116116
dcterms:dateAccepted "2024-02-01" ;
117117
pav:providedBy "http://www.yeastgenome.org" .
118118

119+
obo:GO_0002949 a owl:Class .
120+
119121
dcterms:created a owl:AnnotationProperty .
120122

121123
:f63b3d1b-4bf0-4273-9b6c-fc093a983f16
@@ -355,9 +357,10 @@ dc:date a owl:AnnotationProperty .
355357

356358
gomodel:SGD_S000028512
357359
a owl:Ontology ;
360+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
358361
lego:modelstate "production" ;
359362
dc:contributor "https://orcid.org/0000-0001-6749-615X" , "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-5472-917X" , "https://orcid.org/0000-0002-1775-4998" ;
360-
dc:date "2023-07-12" ;
363+
dc:date "2026-07-30" ;
361364
dc:title "PCC1 (SGD:S000028512)" ;
362365
dcterms:created "2013-08-07" ;
363366
dcterms:dateAccepted "2024-02-01" ;
@@ -366,9 +369,10 @@ gomodel:SGD_S000028512
366369
biolink:in_taxon obo:NCBITaxon_559292 .
367370

368371
:c52e50e0-cbd7-43be-b95b-f2cf41512d40
369-
a owl:NamedIndividual , obo:GO_0070525 ;
372+
a owl:NamedIndividual , obo:GO_0002949 ;
373+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
370374
dc:contributor "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-6749-615X" ;
371-
dc:date "2013-08-07" ;
375+
dc:date "2026-07-30" ;
372376
dcterms:created "2013-08-07" ;
373377
dcterms:dateAccepted "2024-02-01" ;
374378
pav:providedBy "http://www.yeastgenome.org" .
@@ -397,9 +401,10 @@ dc:contributor a owl:AnnotationProperty .
397401
pav:providedBy "http://www.yeastgenome.org" .
398402

399403
:c52e50e0-cbd7-43be-b95b-f2cf41512d40-2
400-
a owl:NamedIndividual , obo:GO_0070525 ;
404+
a owl:NamedIndividual , obo:GO_0002949 ;
405+
rdfs:comment "Automated change 2026-07-30: GO:0070525 replaced by GO:0002949" ;
401406
dc:contributor "https://orcid.org/0000-0001-9043-693X" , "https://orcid.org/0000-0001-6749-615X" ;
402-
dc:date "2013-08-07" ;
407+
dc:date "2026-07-30" ;
403408
dcterms:created "2013-08-07" ;
404409
dcterms:dateAccepted "2024-02-01" ;
405410
pav:providedBy "http://www.yeastgenome.org" .

0 commit comments

Comments
 (0)