how can I invoke this when using higlass-manage view hic-resolutions.cool (following the README) ?
I tried adding the --data-dir before and after view subcommand but to no avail. Is never known.
I've just edited the site-packages source dir to change the hardcoded ~/hg-data into something that works on my system. That helped, but found another issue (I will open it independently, hope you don't mind my spam...)
PS. ultimately I want to make this work for me and colleagues, a PR to fix some of the issues could come, but tbh the way you abstracted docker is a bit opaque to me at the moment. I have dockerized django apps, but not like this
higlass-manage/higlass_manage/start.py
Line 29 in 44d6023
how can I invoke this when using
higlass-manage view hic-resolutions.cool(following the README) ?I tried adding the
--data-dirbefore and afterviewsubcommand but to no avail. Is never known.I've just edited the site-packages source dir to change the hardcoded
~/hg-datainto something that works on my system. That helped, but found another issue (I will open it independently, hope you don't mind my spam...)PS. ultimately I want to make this work for me and colleagues, a PR to fix some of the issues could come, but tbh the way you abstracted docker is a bit opaque to me at the moment. I have dockerized django apps, but not like this