wip: new requirements

Author: hiyama341

.github/workflows/main.yml

@@ -11,7 +11,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ["3.10", "3.11", "3.12"]
+        python-version: ["3.10", "3.11", ] #TODO add 3.12 when supported by all dependencies
 
     # Define job steps
     steps:

requirements.txt

@@ -1,9 +1,9 @@
 # This file is needed for READtheDOCS and GitHub actions- all requirements are installed in the setup.py
-pydna>=5.2.0 
+pydna>=5.5.0 
 pandas>=1.3.0
 benchlingapi>=2.1.12
 numpy>=1.21.0
-biopython>=1.82   
+biopython>=1.83   
 python-dotenv>=0.20.0
 openpyxl>=3.0.9
 wheel>=0.37.1