Cogito/config.yaml at main · justinlietz93/Cogito · GitHub

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# Critique Council Configuration
# This file contains all configuration settings for the application

# API Configuration
api:
  primary_provider: "openai"
  gemini:
    model_name: "gemini-2.5-pro-exp-03-25"
    retries: 3
    temperature: 0.6
    top_p: 1.0
    top_k: 32
    max_output_tokens: 8192
  deepseek:
    model_name: "deepseek-reasoner"
    base_url: "https://api.deepseek.com/v1"
  openai:
    model: "gpt-4o-mini"
    retries: 3
    temperature: 0.2
    max_tokens: 8192

# Reasoning tree configuration
reasoning_tree:
  max_depth: 1
  confidence_threshold: 0.3

# Council orchestrator configuration
council_orchestrator:
  synthesis_confidence_threshold: 0.4

# Directory input configuration
critique:
  directory_input:
    enabled: true
    include:
      - "**/*.md"
      - "**/*.txt"
    exclude:
      - "**/.git/**"
      - "**/node_modules/**"
    recursive: true
    max_files: 200
    max_chars: 1000000
    section_separator: "\n\n---\n\n"
    label_sections: true
  directory_input_overrides:
    syncretic_catalyst:
      order:
        - PROJECT_OVERVIEW.md
        - RESEARCH_CONTEXT.md
        - NEXT_STEPS.md
      label_sections: false
      section_separator: "\n\n---\n\n"

# ArXiv Configuration
arxiv:
  # Whether to enable ArXiv reference lookups during content assessment
  enabled: true

  # Maximum number of references to attach per content point
  max_references_per_point: 3

  # Cache settings
  cache_dir: "storage/arxiv_cache"
  use_cache: true
  use_db_cache: true          # Whether to use database (SQLite) cache instead of file-based cache
  cache_ttl_days: 30          # Number of days before cached entries expire
  cache_cleanup_interval_hours: 24  # How often to run cleanup jobs (in hours)

  # Search settings
  search_sort_by: "relevance"    # Options: relevance, lastUpdatedDate, submittedDate
  search_sort_order: "descending" # Options: ascending, descending

  # Bibliography settings
  update_bibliography: true  # Whether to update LaTeX bibliography with ArXiv references

# LaTeX Configuration
latex:
  # Document settings
  document_class: "article"
  document_options: ["12pt", "a4paper"]
  title: "Critique Council Report"
  use_hyperref: true

  # Template settings
  template_dir: "src/latex/templates"
  main_template: "academic_paper.tex"  # Default, can be overridden
  scientific_template: "scientific_paper.tex"
  philosophical_template: "philosophical_paper.tex"
  preamble_template: "preamble.tex"
  bibliography_template: "bibliography.bib"

  # Content processing settings
  replace_philosophical_jargon: true
  scientific_objectivity_level: "high"  # Options: low, medium, high
  scientific_mode: false  # Whether to use scientific methodology mode
  include_bibliography: true

  # Math settings
  detect_math: true
  math_environments: ["equation", "align", "gather"]
  inline_math_delimiters: ["$", "$"]
  display_math_delimiters: ["$$", "$$"]

  # Output settings
  output_dir: "latex_output"
  output_filename: "critique_report"
  compile_pdf: true  # Set to true to compile PDF with LaTeX
  keep_tex: true     # Keep .tex files after PDF compilation

  # LaTeX compilation settings
  latex_engine: "pdflatex"
  latex_args: ["-interaction=nonstopmode", "-halt-on-error"]
  bibtex_run: true
  latex_runs: 2  # Number of LaTeX compilation passes

  # MiKTeX configuration (Windows-specific)
  miktex:
    # Set a custom MiKTeX path if LaTeX isn't found in PATH
    # Leave empty to use automatic detection
    custom_path: ""

    # Additional search paths for MiKTeX, beyond the default search locations
    additional_search_paths: []