feat: add stout qm9, zinc and pubchem evals #31
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: [main, refactor_namer] | |
| pull_request: | |
| branches: ["**"] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.12" | |
| - name: Install ruff | |
| run: pip install "ruff==0.6.9" | |
| - name: Ruff check | |
| run: ruff check src/bluenamer | |
| - name: Ruff format check | |
| run: ruff format --check src/bluenamer | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12"] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| - name: Set up JDK (for OPSIN) | |
| uses: actions/setup-java@v4 | |
| with: | |
| distribution: temurin | |
| java-version: "17" | |
| - name: Install package | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e ".[dev]" | |
| - name: Run fast tests | |
| run: | | |
| pytest -m "not slow and not dataset" \ | |
| --maxfail=20 \ | |
| --durations=20 |