forgot some ao s

Author: ThHanke

.github/workflows/seed.yml

@@ -73,7 +73,7 @@ jobs:
           sed -i "s/^id:.*/id: ${{ github.event.inputs.ontology_id }}/" "$CONFIG_FILE"
 
           # Replace uribase value
-          sed -i "s|^uribase:.*|uribase: https://w3id.org/pmd/ao|" "$CONFIG_FILE"
+          sed -i "s|^uribase:.*|uribase: https://w3id.org/pmd|" "$CONFIG_FILE"
 
           # Replace uribase_suffix value
           sed -i "s/^uribase_suffix:.*/uribase_suffix: ${{ github.event.inputs.uribase_suffix }}/" "$CONFIG_FILE"

seed-template.yaml

@@ -3,7 +3,7 @@ title: "My Application Ontology"
 github_org: materialdigital
 git_main_branch: main
 repo: heat-treatment-application-ontology
-uribase: https://w3id.org/pmd/ao
+uribase: https://w3id.org/pmd
 uribase_suffix: hto
 
 release_artefacts:

src/ontology/Makefile

@@ -19,7 +19,7 @@ CONFIG_HASH=                c1ff456b7c1ccd8972badcafa0835cc75d4ffbc1077607098d71
 # these can be overwritten on the command line
 
 OBOBASE=                    http://purl.obolibrary.org/obo
-URIBASE=                    https://w3id.org/pmd/ao
+URIBASE=                    https://w3id.org/pmd
 ONT=                        hto
 ONTBASE=                    https://w3id.org/pmd/hto
 EDIT_FORMAT=                owl
@@ -410,7 +410,7 @@ $(IMPORTDIR)/%_import.owl: $(MIRRORDIR)/%.owl $(IMPORTDIR)/%_terms.txt \
 		 remove $(foreach p, $(ANNOTATION_PROPERTIES), --term $(p)) \
 		        --term-file $(IMPORTDIR)/$*_terms.txt $(T_IMPORTSEED) \
 		        --select complement --select annotation-properties \
-		 odk:normalize --base-iri https://w3id.org/pmd/ao \
+		 odk:normalize --base-iri https://w3id.org/pmd \
 		               --subset-decls true --synonym-decls true \
 		 repair --merge-axiom-annotations true \
 		 $(ANNOTATE_CONVERT_FILE)
@@ -420,7 +420,7 @@ $(IMPORTDIR)/%_import.owl: $(MIRRORDIR)/%.owl $(IMPORTDIR)/%_terms.txt \
 ## Module for ontology: pmdco (mirror)
 $(IMPORTDIR)/pmdco_import.owl: $(MIRRORDIR)/pmdco.owl | all_robot_plugins
 	$(ROBOT) annotate --input $< --remove-annotations \
-		 odk:normalize --base-iri https://w3id.org/pmd/ao \
+		 odk:normalize --base-iri https://w3id.org/pmd \
 		               --subset-decls true --synonym-decls true \
 		               --add-source true \
 		 repair --merge-axiom-annotations true \
@@ -572,7 +572,7 @@ $(ONT)-simple.owl: $(EDIT_PREPROCESSED) $(OTHER_SRC) $(SIMPLESEED) $(IMPORT_FILE
 		remove --axioms equivalent \
 		filter --term-file $(SIMPLESEED) --select "annotations ontology anonymous self" --trim true --signature true \
 		reduce -r $(REASONER) $(REDUCE_OPTIONS) \
-		odk:normalize --base-iri https://w3id.org/pmd/ao --subset-decls true --synonym-decls true \
+		odk:normalize --base-iri https://w3id.org/pmd --subset-decls true --synonym-decls true \
 		repair --merge-axiom-annotations true \
 		$(SHARED_ROBOT_COMMANDS) annotate --ontology-iri $(ONTBASE)/$@ $(ANNOTATE_ONTOLOGY_VERSION) --output $@.tmp.owl && mv $@.tmp.owl $@
 # ----------------------------------------

src/ontology/hto-odk.yaml

@@ -3,7 +3,7 @@ title: "My Application Ontology"
 github_org: materialdigital
 git_main_branch: main
 repo: heat-treatment-application-ontology
-uribase: https://w3id.org/pmd/ao
+uribase: https://w3id.org/pmd
 uribase_suffix: hto
 
 release_artefacts:

src/ontology/hto.owl

@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
-<rdf:RDF xmlns="https://w3id.org/pmd/ao/hto.owl#"
-     xml:base="https://w3id.org/pmd/ao/hto.owl"
+<rdf:RDF xmlns="https://w3id.org/pmd/hto.owl#"
+     xml:base="https://w3id.org/pmd/hto.owl"
      xmlns:co="https://w3id.org/pmd/co/"
      xmlns:dc="http://purl.org/dc/elements/1.1/"
      xmlns:obo="http://purl.obolibrary.org/obo/"
@@ -13,7 +13,7 @@
      xmlns:swrl="http://www.w3.org/2003/11/swrl#"
      xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
      xmlns:terms="http://purl.org/dc/terms/">
-    <owl:Ontology rdf:about="https://w3id.org/pmd/ao/hto.owl">
+    <owl:Ontology rdf:about="https://w3id.org/pmd/hto.owl">
         <owl:versionIRI rdf:resource="https://w3id.org/pmd/hto/releases/2025-11-11/hto.owl"/>
         <terms:contributor>Jannis Grundmann</terms:contributor>
         <terms:creator rdf:resource="https://orcid.org/0000-0002-9014-2920"/>

src/ontology/hto.ttl

@@ -1,4 +1,4 @@
-@prefix : <https://w3id.org/pmd/ao/hto.ttl#> .
+@prefix : <https://w3id.org/pmd/hto.ttl#> .
 @prefix co: <https://w3id.org/pmd/co/> .
 @prefix dc: <http://purl.org/dc/elements/1.1/> .
 @prefix obo: <http://purl.obolibrary.org/obo/> .
@@ -11,9 +11,9 @@
 @prefix swrl: <http://www.w3.org/2003/11/swrl#> .
 @prefix swrlb: <http://www.w3.org/2003/11/swrlb#> .
 @prefix terms: <http://purl.org/dc/terms/> .
-@base <https://w3id.org/pmd/ao/hto.ttl> .
+@base <https://w3id.org/pmd/hto.ttl> .
 
-<https://w3id.org/pmd/ao/hto.ttl> rdf:type owl:Ontology ;
+<https://w3id.org/pmd/hto.ttl> rdf:type owl:Ontology ;
                                    owl:versionIRI <https://w3id.org/pmd/hto/releases/2025-11-11/hto.ttl> ;
                                    terms:contributor "Jannis Grundmann" ;
                                    terms:creator <https://orcid.org/0000-0002-9014-2920> ,