check_deployments.yml

name: Check and fix missing deployments
on:
  schedule:
    # Run weekly on Monday at 6 AM UTC
    - cron: '0 6 * * 1'
  workflow_dispatch:
env:
  GITHUB_USER: iwc-workflows-bot
jobs:
  check:
    name: Check for missing deployments
    if: github.ref == 'refs/heads/main'
    runs-on: ubuntu-latest
    outputs:
      has-missing: ${{ steps.check.outputs.has-missing }}
      missing-repos: ${{ steps.check.outputs.missing-repos }}
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 1
    - uses: actions/setup-python@v5
      with:
        python-version: '3.11'
    - name: Install dependencies
      run: pip install pyyaml
    - name: Check for missing deployments
      id: check
      run: python scripts/check_missing_deployments.py
      env:
        GH_TOKEN: ${{ github.token }}

  deploy:
    name: Deploy missing workflows
    needs: check
    if: github.ref == 'refs/heads/main' && needs.check.outputs.has-missing == 'true'
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ['3.11']
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 1
    - uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install requirements
      run: pip install -r workflows/requirements.txt
    - name: Generate RO-Crate metadata for workflow repositories
      run: python workflows/gen_crates.py workflows
    - name: Set git user
      run: |
        git config --global user.email "$GITHUB_USER@galaxyproject.org"
        git config --global user.name "$GITHUB_USER"
        git config --global init.defaultBranch main
    - uses: fusion-engineering/setup-git-credentials@v2
      with:
        credentials: 'https://${{ env.GITHUB_USER }}:${{ secrets.IWC_WORKFLOWS_BOT_TOKEN }}@github.com/'
    - name: Deploy missing workflows
      run: |
        while IFS= read -r repo_dir; do
          [ -z "$repo_dir" ] && continue
          echo "Deploying $repo_dir ..."
          planemo workflow_upload --namespace iwc-workflows "$repo_dir"
        done <<< "${{ needs.check.outputs.missing-repos }}"
      env:
        GITHUB_TOKEN: ${{ secrets.IWC_WORKFLOWS_BOT_TOKEN }}