Striped Unifrac C++ implementation #1645
Annotations
10 errors and 5 warnings
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] AxiosError
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] getLineGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"Network I/O Read (MB)"},"timeTicks":{"unit":"auto"}},"lines":[{"label":"Read","color":"#be4d25","points":[{"x":1784110978097,"y":0},{"x":1784110983091,"y":256},{"x":1784110988090,"y":50},{"x":1784110993091,"y":0},{"x":1784110998091,"y":0},{"x":1784111003090,"y":70},{"x":1784111008101,"y":0},{"x":1784111013092,"y":105},{"x":1784111018091,"y":0},{"x":1784111023091,"y":2},{"x":1784111028093,"y":3},{"x":1784111033092,"y":0},{"x":1784111038092,"y":28},{"x":1784111043090,"y":0},{"x":1784111048096,"y":0},{"x":1784111053091,"y":3},{"x":1784111058092,"y":0},{"x":1784111063093,"y":50},{"x":1784111068092,"y":12},{"x":1784111073094,"y":37},{"x":1784111078091,"y":426},{"x":1784111083091,"y":667},{"x":1784111088091,"y":720},{"x":1784111093095,"y":431},{"x":1784111098093,"y":0},{"x":1784111103092,"y":0},{"x":1784111108092,"y":0},{"x":1784111113090,"y":0},{"x":1784111118090,"y":0},{"x":1784111123089,"y":0},{"x":1784111128092,"y":0},{"x":1784111133091,"y":0},{"x":1784111138094,"y":0},{"x":1784111143102,"y":0},{"x":1784111148091,"y":0},{"x":1784111153093,"y":0},{"x":1784111158090,"y":0},{"x":1784111163091,"y":0},{"x":1784111168091,"y":0},{"x":1784111173095,"y":0},{"x":1784111178091,"y":0},{"x":1784111183093,"y":0},{"x":1784111188093,"y":0},{"x":1784111193091,"y":0},{"x":1784111198092,"y":0},{"x":1784111203091,"y":7},{"x":1784111208091,"y":0},{"x":1784111213091,"y":0},{"x":1784111218092,"y":0},{"x":1784111223090,"y":0},{"x":1784111228092,"y":0},{"x":1784111233090,"y":0},{"x":1784111238097,"y":0},{"x":1784111243091,"y":0},{"x":1784111248091,"y":1},{"x":1784111253091,"y":0},{"x":1784111258090,"y":0},{"x":1784111263089,"y":0},{"x":1784111268091,"y":0},{"x":1784111273088,"y":0},{"x":1784111278093,"y":0},{"x":1784111283092,"y":0},{"x":1784111288091,"y":2},{"x":1784111293104,"y":1},{"x":1784111298094,"y":0},{"x":1784111303088,"y":2},{"x":1784111308091,"y":0},{"x":1784111313090,"y":1},{"x":1784111318091,"y":0},{"x":1784111323091,"y":0},{"x":1784111328095,"y":110},{"x":1784111333089,"y":0},{"x":1784111338092,"y":0},{"x":1784111343091,"y":0},{"x":1784111348090,"y":69},{"x":1784111353090,"y":17},{"x":1784111358089,"y":2},{"x":1784111363097,"y":400},{"x":1784111368091,"y":2},{"x":1784111373089,"y":2},{"x":1784111378091,"y":0},{"x":1784111383092,"y":1},{"x":1784111388098,"y":0},{"x":1784111393090,"y":0},{"x":1784111398090,"y":0},{"x":1784111403092,"y":0},{"x":1784111408091,"y":0},{"x":1784111413090,"y":0},{"x":1784111418091,"y":0},{"x":1784111423097,"y":0},{"x":1784111428091,"y":0},{"x":1784111433090,"y":3},{"x":1784111438095,"y":3},{"x":1784111443090,"y":0},{"x":1784111448090,"y":0},{"x":1784111453090,"y":0},{"x":1784111458093,"y":0},{"x":1784111463089,"y":0},{"x":1784111468091,"y":0},{"x":1784111473091,"y":0},{"x":1784111478090,"y":0},{"x":1784111483091,"y":0},{"x":1784111488100,"y":0},{"x":1784111493091,"y":0},{"x":1784111498091,"y":0},{"x":1784111503091,"y":0},{"x":1784111508091,"y":0},{"x":1784111513094,"y":1},{"x":1784111518089,"y":0},{"x":1784111523090,"y":0},{"x":1784111528091,"y":0},{"x":1784111533090,"y":0},{"x":1784111538091,"y":0},{"x":1784111543091,"y":0},{"x":1784111548097,"y":0},{"x":1784111553090,"y":0},{"x":1784111558091,"y":0},{"x":1784111563091,"y":0},{"x":1784111568095,"y":0},{"x":1784111573092,"y":0},{"x":1784111578091,"y":0},{"x":1784111583090,"y":0},{"x":1784111588090,"y":0},{"x":1784111593092,"y":0},{"x":1784111598096,"y":0},{"x":1784111603100,"y":0},{"x":1784111608093,"y":0},{"x":1784111613093,"y":0},{"x":1784111618094,"y":0},{"x":1784111623095,"y":0},{"x":1784111628091,"y":0},{"x":1784111633095,"y":0},{"x":1784111638092,"y":1},{"x":1784111643089,"y":0},{"x":1784111648101,"y":0},{"x":1784111653091,"y":0},{"x":1784111658092,"y":0},{"x":1784111663101,"y":0},{"x":1784111668090,"y":0},{"x":1784111673091,"y":0},{"x":1784111678090,"y":0},{"x":1784111683090,"y":0},{"x":1784111688092,"y":0},{"x":1784111693094,"y":0},{"x":1784111698095,"y":0},{"x":1784111703102,"y":0},{"x":1784111708097,"y":0},{"x":1784111713097,"y":0},{"x
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Post Run neurogenomics/rworkflows@master
AxiosError: Request failed with status code 403
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] AxiosError
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"Memory Usage (MB)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"Used","color":"#377eb899","points":[{"x":1784110978097,"y":2965.640625},{"x":1784110983091,"y":2952.1875},{"x":1784110988090,"y":2931.859375},{"x":1784110993091,"y":2945.78125},{"x":1784110998091,"y":2930.171875},{"x":1784111003090,"y":2900.65625},{"x":1784111008101,"y":2896.578125},{"x":1784111013092,"y":2708.578125},{"x":1784111018091,"y":2850.3125},{"x":1784111023091,"y":2830.40625},{"x":1784111028093,"y":2900.140625},{"x":1784111033092,"y":2897.890625},{"x":1784111038092,"y":2875.6875},{"x":1784111043090,"y":2865.5},{"x":1784111048096,"y":2830.34375},{"x":1784111053091,"y":1643.5625},{"x":1784111058092,"y":1852.390625},{"x":1784111063093,"y":1898.140625},{"x":1784111068092,"y":2132.171875},{"x":1784111073094,"y":2255.6875},{"x":1784111078091,"y":2288.3125},{"x":1784111083091,"y":2346},{"x":1784111088091,"y":2338.328125},{"x":1784111093095,"y":2302.734375},{"x":1784111098093,"y":2698.625},{"x":1784111103092,"y":2690.171875},{"x":1784111108092,"y":2682.453125},{"x":1784111113090,"y":2681.15625},{"x":1784111118090,"y":2693.515625},{"x":1784111123089,"y":2692.9375},{"x":1784111128092,"y":2704.375},{"x":1784111133091,"y":2706.53125},{"x":1784111138094,"y":1522.890625},{"x":1784111143102,"y":1539.5},{"x":1784111148091,"y":1556.90625},{"x":1784111153093,"y":1616.578125},{"x":1784111158090,"y":1666.84375},{"x":1784111163091,"y":1697.234375},{"x":1784111168091,"y":1828.515625},{"x":1784111173095,"y":1839.390625},{"x":1784111178091,"y":1850.390625},{"x":1784111183093,"y":1891.125},{"x":1784111188093,"y":1900.109375},{"x":1784111193091,"y":1932.15625},{"x":1784111198092,"y":1915.390625},{"x":1784111203091,"y":1966.328125},{"x":1784111208091,"y":2012.546875},{"x":1784111213091,"y":2044.921875},{"x":1784111218092,"y":2039.796875},{"x":1784111223090,"y":2037.65625},{"x":1784111228092,"y":2118.015625},{"x":1784111233090,"y":2152.6875},{"x":1784111238097,"y":2167.828125},{"x":1784111243091,"y":2168},{"x":1784111248091,"y":2185.921875},{"x":1784111253091,"y":2189.125},{"x":1784111258090,"y":2195.28125},{"x":1784111263089,"y":2202.234375},{"x":1784111268091,"y":2192.5},{"x":1784111273088,"y":1809.171875},{"x":1784111278093,"y":1865.21875},{"x":1784111283092,"y":1876.828125},{"x":1784111288091,"y":1921.40625},{"x":1784111293104,"y":1919.3125},{"x":1784111298094,"y":1923.234375},{"x":1784111303088,"y":1921.21875},{"x":1784111308091,"y":1923.078125},{"x":1784111313090,"y":1937.03125},{"x":1784111318091,"y":1864.75},{"x":1784111323091,"y":1719.234375},{"x":1784111328095,"y":1896.640625},{"x":1784111333089,"y":1986.796875},{"x":1784111338092,"y":2148.140625},{"x":1784111343091,"y":2230.6875},{"x":1784111348090,"y":2343.53125},{"x":1784111353090,"y":2496.15625},{"x":1784111358089,"y":2653.296875},{"x":1784111363097,"y":2658.53125},{"x":1784111368091,"y":2672.265625},{"x":1784111373089,"y":2777.46875},{"x":1784111378091,"y":2440.359375},{"x":1784111383092,"y":2453.46875},{"x":1784111388098,"y":2276.109375},{"x":1784111393090,"y":2124.765625},{"x":1784111398090,"y":2190.53125},{"x":1784111403092,"y":2324.171875},{"x":1784111408091,"y":2154.4375},{"x":1784111413090,"y":2615.078125},{"x":1784111418091,"y":2100.390625},{"x":1784111423097,"y":2445.390625},{"x":1784111428091,"y":2474.109375},{"x":1784111433090,"y":2204.15625},{"x":1784111438095,"y":2493.21875},{"x":1784111443090,"y":2651.40625},{"x":1784111448090,"y":2694.296875},{"x":1784111453090,"y":2649.453125},{"x":1784111458093,"y":2687.9375},{"x":1784111463089,"y":2247.46875},{"x":1784111468091,"y":2582.25},{"x":1784111473091,"y":2428.234375},{"x":1784111478090,"y":2659.921875},{"x":1784111483091,"y":2486.421875},{"x":1784111488100,"y":2640.078125},{"x":1784111493091,"y":2623.640625},{"x":1784111498091,"y":2596.40625},{"x":1784111503091,"y":2628.09375},{"x":1784111508091,"y":1962.046875},{"x":1784111513094,"y":2196.078125},{"x":1784111518089,"y":2290.109375},{"x":1784111523090,"y":2262.921875},{"x":17841
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Post Run neurogenomics/rworkflows@master
AxiosError: Request failed with status code 403
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] AxiosError
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] getStackedAreaGraph {"options":{"width":1000,"height":500,"xAxis":{"label":"Time"},"yAxis":{"label":"CPU Load (%)"},"timeTicks":{"unit":"auto"}},"areas":[{"label":"User Load","color":"#e41a1c99","points":[{"x":1784110978097,"y":40.076230712711244},{"x":1784110983091,"y":40.5189620758483},{"x":1784110988090,"y":60.01344086021505},{"x":1784110993091,"y":45.45454545454545},{"x":1784110998091,"y":46.27163781624501},{"x":1784111003090,"y":41.21983914209115},{"x":1784111008101,"y":38.6034255599473},{"x":1784111013092,"y":57.267833109017495},{"x":1784111018091,"y":60.36339165545087},{"x":1784111023091,"y":50.76310550763105},{"x":1784111028093,"y":43.219772879091515},{"x":1784111033092,"y":59.17553191489362},{"x":1784111038092,"y":55.0569323509712},{"x":1784111043090,"y":38.20816864295125},{"x":1784111048096,"y":52.84552845528455},{"x":1784111053091,"y":19.009370816599734},{"x":1784111058092,"y":21.46666666666667},{"x":1784111063093,"y":30.11968085106383},{"x":1784111068092,"y":39.759839893262175},{"x":1784111073094,"y":50},{"x":1784111078091,"y":44.333333333333336},{"x":1784111083091,"y":45.18716577540107},{"x":1784111088091,"y":30.288784419073206},{"x":1784111093095,"y":22.430510665804785},{"x":1784111098093,"y":19.337016574585636},{"x":1784111103092,"y":16.498993963782695},{"x":1784111108092,"y":10.455764075067025},{"x":1784111113090,"y":15.46738399462004},{"x":1784111118090,"y":18.704074816299265},{"x":1784111123089,"y":13.426853707414828},{"x":1784111128092,"y":18.30985915492958},{"x":1784111133091,"y":15.236194278110446},{"x":1784111138094,"y":14.457028647568288},{"x":1784111143102,"y":15.374507227332456},{"x":1784111148091,"y":19.201651754989676},{"x":1784111153093,"y":18.808567603748326},{"x":1784111158090,"y":22.78820375335121},{"x":1784111163091,"y":20.933333333333334},{"x":1784111168091,"y":19.25133689839572},{"x":1784111173095,"y":11.26005361930295},{"x":1784111178091,"y":8.165997322623829},{"x":1784111183093,"y":15.425888665325285},{"x":1784111188093,"y":9.926224010731053},{"x":1784111193091,"y":14.986559139784946},{"x":1784111198092,"y":10.46277665995976},{"x":1784111203091,"y":35.690460306871245},{"x":1784111208091,"y":20.229265003371545},{"x":1784111213091,"y":9.121395036887995},{"x":1784111218092,"y":11.051574012056262},{"x":1784111223090,"y":12.91834002677376},{"x":1784111228092,"y":21.543624161073826},{"x":1784111233090,"y":9.25553319919517},{"x":1784111238097,"y":10.649698593436034},{"x":1784111243091,"y":9.274193548387096},{"x":1784111248091,"y":9.491978609625669},{"x":1784111253091,"y":9.986595174262733},{"x":1784111258090,"y":8.950201884253028},{"x":1784111263089,"y":10.06711409395973},{"x":1784111268091,"y":9.418837675350701},{"x":1784111273088,"y":11.595174262734584},{"x":1784111278093,"y":9.345794392523365},{"x":1784111283092,"y":14.68013468013468},{"x":1784111288091,"y":20.201342281879196},{"x":1784111293104,"y":14.533333333333335},{"x":1784111298094,"y":18.7711006076975},{"x":1784111303088,"y":8.60215053763441},{"x":1784111308091,"y":10.416666666666668},{"x":1784111313090,"y":9.109176155391827},{"x":1784111318091,"y":15.214477211796245},{"x":1784111323091,"y":16.566466265865063},{"x":1784111328095,"y":33.13333333333333},{"x":1784111333089,"y":19.973100201748487},{"x":1784111338092,"y":17.43486973947896},{"x":1784111343091,"y":32.021347565043364},{"x":1784111348090,"y":28.466175485599464},{"x":1784111353090,"y":27.722110888443552},{"x":1784111358089,"y":29.27807486631016},{"x":1784111363097,"y":26.466666666666665},{"x":1784111368091,"y":21.73913043478261},{"x":1784111373089,"y":48.93617021276596},{"x":1784111378091,"y":61.111111111111114},{"x":1784111383092,"y":75.56591211717709},{"x":1784111388098,"y":61.71352074966533},{"x":1784111393090,"y":29.666666666666668},{"x":1784111398090,"y":65.7543391188251},{"x":1784111403092,"y":82.68974700399467},{"x":1784111408091,"y":67.39853626081171},{"x":1784111413090,"y":69.5187165775401},{"x":1784111418091,"y":43.95457581830327},{"x":1784111423097,"y":62.891405729513664},{"x":1784111428091,"y":62.658650634602544},{"x":1784111433090,"y":74.0839
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Post Run neurogenomics/rworkflows@master
AxiosError: Request failed with status code 403
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Post Run neurogenomics/rworkflows@master
[Workflow Telemetry] AxiosError
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Complete job
Node.js 20 is deprecated. The following actions target Node.js 20 but are being forced to run on Node.js 24: actions/cache@v4, catchpoint/workflow-telemetry-action@v2. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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Run neurogenomics/rworkflows@master
dependencies ‘BiocVersion’, ‘BiocStyle’ are not available
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Run neurogenomics/rworkflows@master
The following taps are not trusted:
aws/tap
Homebrew is currently ignoring formulae, casks and commands from these taps because tap trust is required.
Untap them with:
brew untap aws/tap
Trust specific formulae, casks and commands with:
brew trust --formula <user>/<tap>/<formula>
brew trust --cask <user>/<tap>/<cask>
brew trust --command <user>/<tap>/<command>
Whole-tap trust is broader and includes all current and future formulae,
casks and commands from the listed taps. Trust whole taps with:
brew trust aws/tap
To disable trust checks:
export HOMEBREW_NO_REQUIRE_TAP_TRUST=1
This is not recommended and will be removed in a later release.
For more information, see:
https://docs.brew.sh/Tap-Trust
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Run neurogenomics/rworkflows@master
imagemagick@6 has been deprecated because it is end of life and only receives security updates! It will be disabled on 2029-04-01.
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Run neurogenomics/rworkflows@master
The following taps are not trusted:
aws/tap
Homebrew is currently ignoring formulae, casks and commands from these taps because tap trust is required.
Untap them with:
brew untap aws/tap
Trust specific formulae, casks and commands with:
brew trust --formula <user>/<tap>/<formula>
brew trust --cask <user>/<tap>/<cask>
brew trust --command <user>/<tap>/<command>
Whole-tap trust is broader and includes all current and future formulae,
casks and commands from the listed taps. Trust whole taps with:
brew trust aws/tap
To disable trust checks:
export HOMEBREW_NO_REQUIRE_TAP_TRUST=1
This is not recommended and will be removed in a later release.
For more information, see:
https://docs.brew.sh/Tap-Trust
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