ENBI score could be used to measure dysbiosis.
It simple to calculate from co-abundance network weights (equation S12).
In that paper, this is tested with two cross-sectional methods: FlashWeave (Julia) and BEEM-Static (Python) and one longitudinal (LIMITS / R, available in seqtime package where we collaborated with KF).
Including cross-sectional method would be very useful if easy to add.. In principle other co-abundance networks could be considered but easier to cite the ones validated here.
ENBI score could be used to measure dysbiosis.
It simple to calculate from co-abundance network weights (equation S12).
In that paper, this is tested with two cross-sectional methods: FlashWeave (Julia) and BEEM-Static (Python) and one longitudinal (LIMITS / R, available in seqtime package where we collaborated with KF).
Including cross-sectional method would be very useful if easy to add.. In principle other co-abundance networks could be considered but easier to cite the ones validated here.