Task is given an input symlink to the absolute path of an input file (residing outside the task directory).
It moves or copies the symlink within its working directory (or otherwise somehow creates a new symlink to the input file's absolute path).
Miniwdl rejects any attempt for the task outputs to use the relative path to the new symlink.
Similar to chanzuckerberg/miniwdl#623 but arises in more cases because of the way miniwdl-aws passes input files as symlinks. We hit this even if the task copies the input file (because it ends up copying just the link).
Task is given an input symlink to the absolute path of an input file (residing outside the task directory).
It moves or copies the symlink within its working directory (or otherwise somehow creates a new symlink to the input file's absolute path).
Miniwdl rejects any attempt for the task outputs to use the relative path to the new symlink.
Similar to chanzuckerberg/miniwdl#623 but arises in more cases because of the way miniwdl-aws passes input files as symlinks. We hit this even if the task copies the input file (because it ends up copying just the link).