Fix CI workflow and add steps to run tests #16

	name: CI

	on:
	push:
	branches:
	- main
	pull_request:
	workflow_dispatch:
	merge_group:

	concurrency:
	group: ${{ github.workflow }}-${{ github.event.pull_request.number \|\| github.sha }}
	cancel-in-progress: true

	permissions:
	contents: read

	jobs:
	lint:
	runs-on: ubuntu-latest
	strategy:
	fail-fast: true
	max-parallel: 4
	matrix:
	# python-version: ["3.8", "3.9", "3.10", "3.11", "3.12", "3.13", "3.14"]
	python-version: ["3.8"]
	steps:
	- uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1
	with:
	persist-credentials: false
	- name: Install uv
	uses: astral-sh/setup-uv@61cb8a9741eeb8a550a1b8544337180c0fc8476b # v7.2.0
	id: setup-uv
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	uv venv
	uv run python --version
	uv run pip install -e .[dev]
	- run: uv run flake8 ./fhir/resources/
	- run: uv run black --check fhir/resources/
	# monthly cache updates
	- run: echo "cache_id=$(date --utc '+%m')" >> "$GITHUB_ENV"
	- uses: actions/cache@9255dc7a253b0ccc959486e2bca901246202afeb # v5.0.1
	with:
	key: fhir-resources-${{ env.cache_id }}
	path: .cache
	restore-keys: \|
	fhir-resources-
	- name: Run main tests
	run: \|
	uv run pytest tests
	- name: Run STU3 tests
	run: \|
	uv run pytest fhir/resources/STU3/tests
	- name: Run R4B tests
	run: \|
	uv run pytest -s --cov=fhir/resources/R4B/tests -s --tb=native -v --cov-report term-missing --cov-append fhir/resources/R4B/tests
	- name: Run R5 tests
	run: \|
	uv run pytest -s --cov=fhir/resources/tests -s --tb=native -v --cov-report term-missing --cov-append fhir/resources/tests

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