Merge ontoportal-lirmm-development into main

Author: mdorf

.coveralls.yml

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+repo_token: VCzjHF1tTiWms12qHsCsrQyId4YWSQlfH

.github/workflows/ci.yml

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+# This workflow runs continuous CI across different versions of ruby on all branches and pull requests to develop.
+
+name: CI
+on:
+  push:
+    branches: [ '**' ]
+  pull_request:
+    branches: [ develop ]
+  workflow_dispatch:
+
+jobs:
+  tests:
+    name: Ruby ${{ matrix.ruby }} ${{ matrix.gemfile }}
+    if: "contains(github.event.commits[0].message, '[ci skip]') == false"
+    runs-on: ubuntu-latest
+    env:
+      CI: true
+      BUNDLE_GEMFILE: "${{ matrix.gemfile }}"
+      ALLOW_FAILURES: ${{ endsWith(matrix.ruby, 'head') }}
+    strategy:
+      fail-fast: false
+      matrix:
+        ruby: [2.6, 2.7, '3.0', 3.1, 3.2, ruby-head, jruby]
+    steps:
+      - name: Clone repository
+        uses: actions/checkout@v3
+      - name: Set up Ruby
+        uses: ruby/setup-ruby@v1
+        with:
+          ruby-version: ${{ matrix.ruby }}
+      - name: Install dependencies
+        run: bundle install --jobs 4 --retry 3
+      - name: Run tests
+        run: ruby --version; bundle exec rspec spec || $ALLOW_FAILURES
+      - name: Coveralls GitHub Action
+        uses: coverallsapp/github-action@v2
+        if: ${{ matrix.ruby == '3.0' && matrix.gemfile == 'Gemfile' }}
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/generate-docs.yml

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+name: Build & deploy documentation
+on:
+  push:
+    branches:
+      - master
+  workflow_dispatch:
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    name: Update gh-pages with docs
+    steps:
+      - name: Clone repository
+        uses: actions/checkout@v3
+      - name: Set up Ruby
+        uses: ruby/setup-ruby@v1
+        with:
+          ruby-version: "3.1"
+      - name: Install required gem dependencies
+        run: gem install yard --no-document
+      - name: Build YARD Ruby Documentation
+        run: yardoc
+      - name: Deploy
+        uses: peaceiris/actions-gh-pages@v3
+        with:
+          github_token: ${{ secrets.GITHUB_TOKEN }}
+          publish_dir: ./doc/yard
+          publish_branch: gh-pages

.gitignore

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+.DS_Store
+.tmp
+.yardoc
+*~
+*.gem
+*.lock
+.idea
+pkg
+tmp
+doc
+coverage
+.bundle
+/.byebug_history
+.ruby-version
+
+.idea/
+
+*.iml

CONTRIBUTING.md

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+# How to contribute
+
+Community contributions are essential for keeping Ruby RDF great. We want to keep it as easy as possible to contribute changes that get things working in your environment. There are a few guidelines that we need contributors to follow so that we can have a chance of keeping on top of things.
+
+## Development
+
+This repository uses [Git Flow](https://github.com/nvie/gitflow) to manage development and release activity. All submissions _must_ be on a feature branch based on the _develop_ branch to ease staging and integration.
+
+* create or respond to an issue on the [Github Repository](https://github.com/ruby-rdf/sparql-client/issues)
+* Fork and clone the repo:
+  `git clone git@github.com:your-username/sparql-client.git`
+* Install bundle:
+  `bundle install`
+* Create tests in RSpec and make sure you achieve at least 90% code coverage for the feature your adding or behavior being modified.
+* Push to your fork and [submit a pull request][pr].
+
+## Do's and Dont's
+* Do your best to adhere to the existing coding conventions and idioms.
+* Don't use hard tabs, and don't leave trailing whitespace on any line.
+  Before committing, run `git diff --check` to make sure of this.
+* Do document every method you add using [YARD][] annotations. Read the
+  [tutorial][YARD-GS] or just look at the existing code for examples.
+* Don't touch the `.gemspec` or `VERSION` files. If you need to change them,
+  do so on your private branch only.
+* Do feel free to add yourself to the `CREDITS` file and the
+  corresponding list in the the `README`. Alphabetical order applies.
+* Don't touch the `AUTHORS` file. If your contributions are significant
+  enough, be assured we will eventually add you in there.
+* Do note that in order for us to merge any non-trivial changes (as a rule
+  of thumb, additions larger than about 15 lines of code), we need an
+  explicit [public domain dedication][PDD] on record from you,
+  which you will be asked to agree to on the first commit to a repo within the organization.
+  Note that the agreement applies to all repos in the [Ruby RDF](https://github.com/ruby-rdf/) organization.
+
+[YARD]:    https://yardoc.org/
+[YARD-GS]: https://rubydoc.info/docs/yard/file/docs/GettingStarted.md
+[PDD]:              https://unlicense.org/#unlicensing-contributions
+[pr]:      https://github.com/ruby-rdf/rdf/compare/

CREDITS

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+* Christoph Badura <bad@bsd.de>
+* Thomas Feron <tho.feron@gmail.com>
+* James Hetherington <jamespjh@googlemail.com>
+* Gabriel Horner <gabriel.horner@gmail.com>
+* Nicholas Humfrey <njh@aelius.com>
+* Fumihiro Kato <fumi@fumi.me>
+* David Nielsen <david@graveyard.dk>
+* Thamaraiselvan Poomalai <p.thamarai@gmail.com>
+* Michael Sokol <mikaa123@gmail.com>
+* Yves Raimond <yves.raimond@bbc.co.uk>
+* Danny Tran <dannybtran@gmail.com>
+* Nick Gottlieb <ngottlieb@gmail.com>

Gemfile

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+source "https://rubygems.org"
+
+gemspec
+
+gem 'rdf',                git: "https://github.com/ruby-rdf/rdf",                 tag: "3.2.11"
+gem 'rdf-aggregate-repo', git: "https://github.com/ruby-rdf/rdf-aggregate-repo",  tag: "3.2.0"
+gem 'sparql',             git: "https://github.com/ruby-rdf/sparql",              tag: "3.2.0"
+gem "nokogiri",           '~> 1.13', '>= 1.13.4'
+
+group :development, :test do
+  gem 'ebnf',           git: "https://github.com/dryruby/ebnf",                 tag: "2.3.5"
+  gem 'rdf-isomorphic', git: "https://github.com/ruby-rdf/rdf-isomorphic",      tag: "3.2.0"
+  gem 'rdf-spec',       git: "https://github.com/ruby-rdf/rdf-spec",            tag: "3.2.0"
+  gem 'rdf-turtle',     git: "https://github.com/ruby-rdf/rdf-turtle",          tag: "3.2.0"
+  gem "rdf-xsd",        git: "https://github.com/ruby-rdf/rdf-xsd",             tag: "3.2.0"
+  gem 'sxp'
+  gem "redcarpet",      platform: :ruby
+  gem 'simplecov',      '~> 0.21',  platforms: :mri
+  gem 'simplecov-lcov', '~> 0.8',  platforms: :mri
+end
+
+group :debug do
+  gem 'shotgun'
+  gem "byebug", platforms: :mri
+  gem "pry"
+end

Gemfile-pure

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+source "https://rubygems.org"
+
+gemspec
+
+gem 'rdf',                git: "https://github.com/ruby-rdf/rdf",                 branch: "develop"
+gem 'rdf-aggregate-repo', git: "https://github.com/ruby-rdf/rdf-aggregate-repo",  branch: "develop"
+gem 'sparql',             git: "https://github.com/ruby-rdf/sparql",              branch: "develop"
+#gem "nokogiri",           '~> 1.8'
+
+group :development, :test do
+  gem 'ebnf',           git: "https://github.com/dryruby/ebnf",                 branch: "develop"
+  gem 'rdf-isomorphic', git: "https://github.com/ruby-rdf/rdf-isomorphic",      branch: "develop"
+  gem 'rdf-spec',       git: "https://github.com/ruby-rdf/rdf-spec",            branch: "develop"
+  gem 'rdf-turtle',     git: "https://github.com/ruby-rdf/rdf-turtle",          branch: "develop"
+  gem "rdf-xsd",        git: "https://github.com/ruby-rdf/rdf-xsd",             branch: "develop"
+  gem 'sxp',            git: "https://github.com/dryruby/sxp.rb",               branch: "develop"
+  gem "redcarpet",      platform: :ruby
+  gem 'simplecov',      platforms: :mri
+  gem 'coveralls',      '~> 0.8', platforms: :mri
+end
+
+group :debug do
+  gem 'shotgun'
+  gem "byebug", platforms: :mri
+  gem "pry"
+end