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@intbio-ncl Integrative bioinformatics @ NCL

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    17 repositories

    • ro-crate-rs

      Public
      A Rust library for defining RO-Crates (https://www.researchobject.org/ro-crate/1.1/) for research data.
      Rust
      •
      Apache License 2.0
      •3•10•1•0•Updated Jun 28, 2026Jun 28, 2026

    • BiomationScripterLib

      Public
      A Python library to assist with scripting bio-automation protocols
      synthetic-biologylab-automationmolecular-biology
      synthetic-biologylab-automationmolecular-biologylaboratory-automationdna-assemblyliquid-handlingopentronsliquid-handling-robot
      Python
      •
      MIT License
      •0•5•13•1•Updated Oct 13, 2025Oct 13, 2025

    • csn_workflow

      Public
      Python
      •0•0•0•0•Updated Apr 8, 2025Apr 8, 2025

    • Probablistic-Functional-Integrated-Networks

      Public
      PhD Project
      Python
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • seq-mdp

      Public
      Solve the Maximum Diversity Problem for protein sequence sampling.
      Python
      •1•2•1•0•Updated Oct 9, 2023Oct 9, 2023

    • genet2

      Public
      Web Application for the integration, enhancement and representation of Synthetic Biology centric data.
      Python
      •
      MIT License
      •0•4•5•0•Updated Mar 22, 2023Mar 22, 2023

    • csc8221-synbioautomation

      Public
      course scripts for synbio automation course
      Python
      •0•0•0•0•Updated Jan 23, 2023Jan 23, 2023

    • ROTc

      Public
      Recursive Orthogonal Threshold classifier.
      C++
      •0•0•1•0•Updated Jan 10, 2023Jan 10, 2023

    • net_vis_syn_bio

      Public
      Network Visualisation Synthetic Biology
      Python
      •
      MIT License
      •0•2•4•0•Updated Mar 16, 2022Mar 16, 2022

    • sbol_graph_visualiser

      Public
      A Tool to visualise SBOL in graphical views.
      Python
      •0•0•3•0•Updated Jul 21, 2021Jul 21, 2021

    • DNN_Carbapenem_Resistance

      Public
      Prediction of future carbapanem resistance variants
      Python
      •0•0•0•0•Updated Jun 7, 2021Jun 7, 2021

    • seq-sublight

      Public
      Highlight subsets of protein sequences from a larger superset on a Sequence Similarity Network.
      Python
      •0•0•0•0•Updated May 16, 2021May 16, 2021

    • ontology_server

      Public
      Language Server for Data Mining and Natural Language around SBOL and Related Ontologies/Terms.
      Python
      •0•0•0•0•Updated Mar 2, 2021Mar 2, 2021

    • ensep

      Public
      Repository of code related to EnSeP, the enzyme search platform.
      Python
      •0•0•0•0•Updated Feb 13, 2021Feb 13, 2021

    • chimera_evolve

      Public
      Design of CDS for 1+ organisms by optimisation of the Chimera Average Repetitive Substring (ARS) metric.
      Rust
      •2•0•0•0•Updated Feb 4, 2021Feb 4, 2021

    • shortbol

      Public
      ShortBOL - A abstract language implementing the SBOL Data Model.
      Python
      •1•3•10•0•Updated Aug 6, 2020Aug 6, 2020

    • ClusterMerge

      Public
      Merges a PFIN with the subgraph for PFIN extracted from RepotrialDB
      Python
      •0•0•0•0•Updated Apr 2, 2020Apr 2, 2020
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