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    • Documentation and configuration files for deploying the Knowledge Systems Group's services using kubernetes
      CSS
      3313254Updated Jun 22, 2026Jun 22, 2026
    • Java
      GNU Affero General Public License v3.0
      1135726Updated Jun 22, 2026Jun 22, 2026
    • Plugin for Traefik to allow/disallow traffic based on user agents.
      Go
      Apache License 2.0
      6000Updated May 21, 2026May 21, 2026
    • Biomni

      Public
      Biomni: a general-purpose biomedical AI agent
      Python
      Apache License 2.0
      600000Updated May 21, 2026May 21, 2026
    • Go
      0000Updated Apr 13, 2026Apr 13, 2026
    • reVUE

      Public
      repository for Variants with Unexpected Effects (in cancer)
      TypeScript
      MIT License
      2140Updated Oct 2, 2025Oct 2, 2025
    • Jupyter Notebook
      MIT License
      1051Updated Oct 2, 2025Oct 2, 2025
    • Jupyter Notebook
      0000Updated Jun 25, 2025Jun 25, 2025
    • Used for issue tracking of data curation efforts.
      00450Updated Jan 8, 2025Jan 8, 2025
    • signal

      Public
      Somatic Integration of Germline Alterations in cancer
      TypeScript
      MIT License
      52187Updated Mar 4, 2023Mar 4, 2023
    • Repository for tracking uncategorizable issues related to backend pipelines work
      00370Updated Aug 19, 2021Aug 19, 2021
    • vcf2maf

      Public
      Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
      Perl
      Other
      222001Updated Apr 6, 2020Apr 6, 2020
    • Repository for MSK import pipelines dashboard
      0000Updated Jun 11, 2019Jun 11, 2019
    • Algorithms to detect mutational hotspots
      Java
      MIT License
      4900Updated Aug 1, 2018Aug 1, 2018
    • oncokb-curation

      Public archive
      OncoKB curation website web module
      JavaScript
      GNU General Public License v3.0
      1000Updated Jun 7, 2016Jun 7, 2016
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