Rift o4d junior calmarg in loop: AFTER main 'distance' merge #119

Workflow file for this run

	name: CI

	on:
	push:
	branches: [rift_O4d, rift_O4d_junior, rift_O4d_gmm_gpu]
	pull_request:
	branches: [rift_O4d, rift_O4d_junior, rift_O4d_gmm_gpu]
	workflow_dispatch:
	schedule:
	# Weekly canary so a fresh UPSTREAM release (e.g. swig>=4.4.0 -- see #136)
	# is caught even when there is no RIFT commit. Mondays 06:00 UTC.
	- cron: '0 6 * * 1'

	concurrency:
	group: ${{ github.workflow }}-${{ github.ref }}
	cancel-in-progress: true

	jobs:
	install:
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	# Smoke-test that the package resolves and installs across the supported
	# Python range, including the legacy py3.9 lane (paired with the pinned
	# numpy==1.24.4 used by the integrator gate below).
	python-version: ['3.9', '3.10', '3.11', '3.12', '3.13']
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install system dependencies
	run: sudo apt-get update && sudo apt-get install -y libgsl-dev
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install coverage pytest pytest-cov --break-system-packages
	python -m pip install --editable . --break-system-packages

	help-check:
	needs: install
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.10'
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install coverage pytest --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Run help check
	run: .travis/test-all-bin.sh

	import-check:
	needs: install
	runs-on: ubuntu-latest
	# Verify every declared module imports cleanly under both the pinned
	# legacy lane (py3.9 + numpy 1.24.4) and the modern lane (py3.12 +
	# numpy 2.x). Catches platform-portability regressions like the
	# np.float128 import-time crash on numpy 2.x systems without an
	# extended-precision long double.
	strategy:
	fail-fast: false
	matrix:
	include:
	- lane: legacy
	python-version: '3.9'
	numpy-pin: 'numpy==1.24.4'
	- lane: modern
	python-version: '3.12'
	numpy-pin: 'numpy>=2.0,<3.0'
	name: import-check (${{ matrix.lane }} py${{ matrix.python-version }})
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	# Pin numpy AFTER requirements.txt so it overrides the unpinned
	# 'numpy' line in requirements.txt without changing the file.
	python -m pip install '${{ matrix.numpy-pin }}' --break-system-packages
	python -m pip install coverage pytest --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Show resolved versions
	run: \|
	python -c "import sys, numpy, scipy; print('python', sys.version); print('numpy', numpy.__version__); print('scipy', scipy.__version__)"
	- name: Run import check
	run: python .travis/test-all-mod.py

	sim-manager-check:
	needs: install
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.10'
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install coverage pytest --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Install optional condor builder dep
	# lscsoft-glue is optional; with it, the smoke test also exercises the
	# Condor build_master_job + generate_dag round trip. Without it the
	# condor portion of the smoke test simply skips.
	continue-on-error: true
	run: python -m pip install lscsoft-glue --break-system-packages
	- name: Run simulation_manager smoke test
	run: bash .travis/test-simulation-manager.sh

	integration-check:
	needs: install
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.10'
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install coverage pytest pytest-cov --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Run integration sampler check
	run: bash .travis/test-integrate.sh

	asimov-integration:
	needs: install
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	include:
	- asimov-series: '0.5'
	asimov-spec: 'asimov>=0.5,<0.6'
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.11'
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install system dependencies
	run: sudo apt-get update && sudo apt-get install -y libgsl-dev
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install coverage pytest --break-system-packages
	python -m pip install --editable . --break-system-packages
	python -m pip install htcondor --only-binary=:all: --break-system-packages
	- name: Install Asimov
	run: python -m pip install '${{ matrix.asimov-spec }}' 'asimov-gwdata>=0.4,<0.5' --break-system-packages
	- name: Run Asimov integration test
	run: bash .travis/test-asimov.sh

	test-run:
	needs: install
	runs-on: ubuntu-latest
	# Integrator + posterior gate. We run this in two CI lanes:
	# - legacy : py3.9 + numpy 1.24.4 -- the historically known-good
	# configuration on Linux x86_64 where np.float128 is real.
	# - modern : py3.12 + numpy 2.x -- the forward-looking target. Catches
	# numpy 2.x removals (np.product, np.cumproduct, np.in1d,
	# np.alltrue, np.float_) and scipy >= 1.16 mvnun removal.
	# Both lanes must pass test-integrate.sh's GMM/AC/AV consistency check.
	strategy:
	fail-fast: false
	matrix:
	include:
	- lane: legacy
	python-version: '3.9'
	numpy-pin: 'numpy==1.24.4'
	- lane: modern
	python-version: '3.12'
	numpy-pin: 'numpy>=2.0,<3.0'
	name: test-run (${{ matrix.lane }} py${{ matrix.python-version }})
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}
	cache: 'pip'
	cache-dependency-path: requirements.txt
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	# Pin numpy AFTER requirements.txt so it overrides the unpinned
	# 'numpy' line in requirements.txt without changing the file.
	python -m pip install '${{ matrix.numpy-pin }}' --break-system-packages
	python -m pip install coverage pytest pytest-cov --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Show resolved versions
	run: \|
	python -c "import sys, numpy, scipy; print('python', sys.version); print('numpy', numpy.__version__); print('scipy', scipy.__version__)"
	- name: Run test scripts
	run: \|
	. .travis/test-coord.sh
	. .travis/test-posterior.sh
	bash .travis/test-run.sh
	bash .travis/test-run-alts.sh
	bash .travis/test-build.sh
	- name: Upload test logs on failure
	if: failure()
	uses: actions/upload-artifact@v4
	with:
	name: test-logs-${{ matrix.lane }}-py${{ matrix.python-version }}
	path: \|
	*/.log
	*/test-results/.xml

	container-dep-canary:
	# Dependency-resolution canary for the container build. The container ships
	# an UNPINNED dependency set (containers/requirements-container.txt) and
	# clones RIFT at build time, so a fresh upstream release can silently break
	# RIFT and only surface when a container rebuild fails (e.g. swig>=4.4.0,
	# issue #136). This job installs that same unpinned set + exercises the pixi
	# swig-post44 deployment lane and runs the import check, so we get an early
	# warning. Runs on push/PR AND weekly (see on.schedule).
	#
	# Non-blocking: it tracks UPSTREAM changes outside any PR author's control,
	# so a red run should alert maintainers, not block unrelated PRs.
	runs-on: ubuntu-latest
	continue-on-error: true
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.10' # matches the container's python3.10
	- name: Enable symlink
	run: sudo ln -sf $(which python3) /usr/bin/python
	- name: Install system dependencies
	run: sudo apt-get update && sudo apt-get install -y libgsl-dev
	- name: Install UNPINNED container dependency set (latest upstream)
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	# Strip the GPU-only cupy line: there is no GPU/driver in CI and the
	# canary's goal is dependency RESOLUTION + RIFT import, not cupy exec.
	# (cupy is not actually listed in requirements-container.txt, but be
	# defensive in case it is added later.)
	grep -viE '^\s*cupy' containers/requirements-container.txt > /tmp/req-canary.txt
	python -m pip install -r /tmp/req-canary.txt --break-system-packages
	python -m pip install pytest --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Show resolved versions
	run: \|
	python -c "import sys, numpy, scipy; print('python', sys.version); print('numpy', numpy.__version__); print('scipy', scipy.__version__)"
	- name: Import check (latest container deps)
	run: python .travis/test-all-mod.py

	container-swig-canary:
	# Companion to container-dep-canary: exercise the pixi swig-post44 lane,
	# which is the direct issue-#136 detector (swig>=4.4.0 breaking RIFT's
	# generated bindings). Kept as its own job so a swig failure is distinct
	# from a general dependency-resolution failure. Also non-blocking.
	runs-on: ubuntu-latest
	continue-on-error: true
	steps:
	- uses: actions/checkout@v4
	- name: Install system dependencies
	run: sudo apt-get update && sudo apt-get install -y libgsl-dev
	- uses: prefix-dev/setup-pixi@v0.8.1
	with:
	environments: swig-post44
	- name: swig version (post-4.4 lane)
	run: pixi run -e swig-post44 swig-version
	- name: Install RIFT (post-4.4 swig lane)
	run: pixi run -e swig-post44 install-rift
	- name: Import check (post-4.4 swig lane)
	run: pixi run -e swig-post44 import-check

	docs:
	runs-on: ubuntu-latest
	permissions:
	contents: write
	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v5
	with:
	python-version: '3.11'
	cache: 'pip'
	cache-dependency-path: \|
	requirements.txt
	docs/requirements.txt
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip --break-system-packages
	python -m pip install -r requirements.txt --break-system-packages
	python -m pip install -r docs/requirements.txt --break-system-packages
	python -m pip install --editable . --break-system-packages
	- name: Build docs
	run: \|
	cd docs
	make clean
	cd ..
	sphinx-build docs/source/ docs/build/
	- name: Deploy to GitHub Pages
	if: github.event_name == 'push' && github.ref == 'refs/heads/rift_O4d'
	uses: peaceiris/actions-gh-pages@v3
	with:
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: ./docs/build/
	publish_branch: gh-pages
	force_push: true

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Rift o4d junior calmarg in loop: AFTER main 'distance' merge #119

Workflow file

Rift o4d junior calmarg in loop: AFTER main 'distance' merge #119

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Workflow file for this run