STpuppeteer/pyproject.toml at devel · pkharchenko/STpuppeteer · GitHub

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[build-system]
requires = ["setuptools>=61.0"]
build-backend = "setuptools.build_meta"

[project]
name = "STpuppeteer"
version = "0.1.0"
description = "Simulate realistic spatial transcriptomics data for benchmarking deconvolution, segmentation, and transcript-assignment methods."
readme = "README.md"
authors = [{ name = "Jieran Sun", email = "jiersun99@gmail.com" }]
license = { file = "LICENSE" }
requires-python = ">=3.10"
classifiers = [
    "Development Status :: 3 - Alpha",
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
]
dependencies = [
    "numpy>=2.0",
    "scipy>=1.10",
    "pandas>=2.0",
    "shapely>=2.0",
    "geopandas>=1.0",
    "matplotlib>=3.6",
    "seaborn>=0.12",
    "scikit-learn>=1.2",
    "pyarrow>=12.0",
    "fastparquet>=2024.0",
]

[project.urls]
Homepage = "https://github.com/bdsc-tds/STPuppeteer"
Documentation = "https://bdsc-tds.github.io/STPuppeteer"
Source = "https://github.com/bdsc-tds/STPuppeteer"
"Bug Tracker" = "https://github.com/bdsc-tds/STPuppeteer/issues"

[project.optional-dependencies]
spatialdata = ["spatialdata"]
dev = ["pytest", "build", "twine"]
docs = ["mkdocs>=1.5", "mkdocs-material>=9.5", "mkdocs-jupyter>=0.24"]

[tool.setuptools.packages.find]
where = ["src"]
include = ["STpuppeteer*"]