Check package MergeKmeans #12288
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| on: | |
| workflow_dispatch: | |
| inputs: | |
| package: | |
| description: Which package to check | |
| required: true | |
| name: Check a package | |
| run-name: Check package ${{ inputs.package }} | |
| permissions: | |
| contents: write | |
| jobs: | |
| build: | |
| name: Check ${{ inputs.package }} on ${{ matrix.arch }} | |
| runs-on: ubuntu-24.04${{matrix.arch=='arm64' && '-arm' || ''}} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| arch: [ 'amd64', 'arm64' ] | |
| container: | |
| image: ghcr.io/r-devel/rcheckserver/ubuntu:latest | |
| steps: | |
| - name: Install dependencies | |
| timeout-minutes: 90 | |
| run: | | |
| install.packages('${{ inputs.package }}', dependencies = TRUE) | |
| shell: Rscript {0} | |
| - name: Download source package | |
| timeout-minutes: 10 | |
| run: | | |
| avail <- available.packages(repos = 'https://cloud.r-project.org') | |
| writeLines(avail['${{ inputs.package }}', 'Version'], 'version.txt') | |
| download.packages('${{ inputs.package }}', '.', available = avail) | |
| shell: Rscript {0} | |
| - name: Build package | |
| timeout-minutes: 90 | |
| run: | | |
| mkdir mylib | |
| R CMD INSTALL ${{ inputs.package }}_*.tar.gz --library=mylib --use-vanilla 2>&1 | tee install.log | |
| continue-on-error: true | |
| shell: bash | |
| - name: Check package | |
| timeout-minutes: 90 | |
| run: | | |
| R CMD check ${{ inputs.package }}_*.tar.gz --library=mylib --install=check:install.log --no-manual --no-vignettes | |
| continue-on-error: true | |
| shell: bash | |
| env: | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| - name: Write status | |
| timeout-minutes: 10 | |
| run: | | |
| results <- tools:::check_packages_in_dir_results('.')[[1]] | |
| writeLines(results$status, "status.out") | |
| shell: Rscript {0} | |
| - uses: actions/upload-artifact@v7 | |
| if: always() | |
| with: | |
| name: output-${{ matrix.arch }} | |
| path: | | |
| version.txt | |
| install.log | |
| status.out | |
| ${{ inputs.package }}.Rcheck/*.log | |
| ${{ inputs.package }}.Rcheck/tests | |
| compare: | |
| runs-on: ubuntu-latest | |
| name: Compare amd64 and arm64 checks | |
| needs: [build] | |
| container: | |
| image: ghcr.io/r-hub/r-minimal/r-minimal:latest | |
| steps: | |
| - uses: actions/download-artifact@v8 | |
| - name: Compare changes | |
| timeout-minutes: 10 | |
| run: | | |
| changes <- tools::check_packages_in_dir_changes("output-arm64", "output-amd64", sources = TRUE, outputs = TRUE) | |
| x <- subset(changes, grepl("WARNING|ERROR|FAIL", changes$New)) | |
| diff <- sprintf("Package: %s\nCheck: %s%s%s\n", x$Package, x$Check, sprintf("\nAMD64: %s", x$Old), sprintf("\nARM64: %s", x$New)) | |
| version <- readLines("output-arm64/version.txt") | |
| header <- sprintf("# ${{ inputs.package }} %s\n", version) | |
| link <- sprintf("Latest run: %s: https://github.com/${{github.repository}}/actions/runs/${{ github.run_id }}\n", Sys.Date()) | |
| text <- c(header, link, "```", diff, "```") | |
| writeLines(text, con = "changes.md") | |
| shell: Rscript {0} | |
| - uses: actions/upload-artifact@v7 | |
| if: always() | |
| with: | |
| name: changes | |
| path: changes.md | |
| commit: | |
| runs-on: ubuntu-latest | |
| name: Commit results to repository | |
| needs: [build, compare] | |
| steps: | |
| - uses: actions/download-artifact@v8 | |
| with: | |
| path: '/tmp' | |
| - name: Checkout | |
| uses: actions/checkout@v6 | |
| with: | |
| ref: 'main' | |
| - name: Update files | |
| shell: bash | |
| run: | | |
| status_arm=$(cat /tmp/output-arm64/status.out) | |
| status_amd=$(cat /tmp/output-amd64/status.out) | |
| test -f /tmp/output-arm64/install.log || exit 1 | |
| test -f /tmp/output-amd64/install.log || exit 1 | |
| rm -Rf ${{ inputs.package }} | |
| if [ "$status_arm" = "$status_amd" ] || [ "$status_arm" = "OK" ] || [ "$status_arm" = "NOTE" ]; then | |
| echo "ARM64 status: $status_arm" | |
| else | |
| mkdir -p ${{ inputs.package }} | |
| cp -f /tmp/output-arm64/{version.txt,install.log} ${{ inputs.package }} | |
| cp -f /tmp/output-arm64/${{ inputs.package }}.Rcheck/00check.log ${{ inputs.package }} | |
| cp -f /tmp/changes/changes.md ${{ inputs.package }}/README.md | |
| fi | |
| if [ "$status_arm" = "FAILURE" ]; then | |
| echo "" >> ${{ inputs.package }}/00check.log | |
| echo "[FATAL TIMEOUT / HANG]" >> ${{ inputs.package }}/00check.log | |
| fi | |
| - name: Update csv file | |
| shell: bash | |
| run: | | |
| echo "Package,Version,kind,href" > index.csv | |
| for pkgver in */version.txt; do | |
| pkg=$(dirname $pkgver) | |
| ver=$(cat $pkgver) | |
| echo "${pkg},${ver},linux-arm64,https://github.com/${{github.repository}}/tree/HEAD/${pkg}" >> index.csv | |
| done | |
| - name: Commit and push | |
| shell: bash | |
| run: | | |
| version=$(cat /tmp/output-arm64/version.txt) | |
| git config user.name "github-actions[bot]" | |
| git config user.email "github-actions[bot]@users.noreply.github.com" | |
| git add ${{ inputs.package }} index.csv 2>/dev/null || true | |
| git commit -m "${{ inputs.package }} ${version}" || exit 0 | |
| git pull origin main --rebase || true | |
| git push |