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Add functionality to download ChEMBL for offline use #256

Add functionality to download ChEMBL for offline use

Add functionality to download ChEMBL for offline use #256

Triggered via pull request September 5, 2025 12:44
Status Failure
Total duration 17m 9s
Artifacts 4

R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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9 errors, 5 warnings, and 1 notice
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
R CMD check found WARNINGs
ubuntu-latest (devel)
System.IO.IOException: No space left on device : '/home/runner/actions-runner/cached/_diag/Worker_20250905-124439-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id) at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message) at GitHub.Runner.Worker.Worker.RunAsync(String pipeIn, String pipeOut) at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args) System.IO.IOException: No space left on device : '/home/runner/actions-runner/cached/_diag/Worker_20250905-124439-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id) at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message) at GitHub.Runner.Common.Tracing.Error(Exception exception) at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args) Unhandled exception. System.IO.IOException: No space left on device : '/home/runner/actions-runner/cached/_diag/Worker_20250905-124439-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at System.Diagnostics.TraceSource.Flush() at GitHub.Runner.Common.Tracing.Dispose(Boolean disposing) at GitHub.Runner.Common.Tracing.Dispose() at GitHub.Runner.Common.TraceManager.Dispose(Boolean disposing) at GitHub.Runner.Common.TraceManager.Dispose() at GitHub.Runner.Common.HostContext.Dispose(Boolean disposing) at GitHub.Runner.Common.HostContext.Dispose() at GitHub.Runner.Worker.Program.Main(String[] args)
windows-latest (release)
Process completed with exit code 1.
windows-latest (release)
R CMD check found WARNINGs
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
R CMD check found ERRORs
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
R CMD check found ERRORs
macos-latest (release)
'::' or ':::' import not declared from: ‘curl’
windows-latest (release)
'::' or ':::' import not declared from: 'curl'
ubuntu-latest (release)
Fatal error: cannot create 'R_TempDir'
ubuntu-latest (release)
'::' or ':::' import not declared from: ‘curl’
ubuntu-latest (oldrel-1)
'::' or ':::' import not declared from: ‘curl’
windows-latest (release)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677

Artifacts

Produced during runtime
Name Size Digest
Linux-X64-roldrel-1-4-results Expired
916 KB
sha256:47b3e05c28a578449b7138c5751cf0f909827e814ce73b74e32ae0d04255d803
Linux-X64-rrelease-3-results Expired
869 KB
sha256:d865c265ef0b527ff52e49daac56ab968e470f7b1599623425df15a1d9c9ac5b
Windows-X64-rrelease-1-results Expired
920 KB
sha256:ae06714453b3408510f4ddea23d66f7450b2da464c63e830ac010321351a86d0
macOS-ARM64-rrelease-0-results Expired
918 KB
sha256:5262638b27596e0d74448d7695db9901d7ffda8854714fb484e5ac4d4b274a69