Skip to content

Cannot replicate tutorial #153

Description

@m9brady

Hi there,

I'm trying to familiarize by walking through the tutorial here https://ilamb3.readthedocs.io/en/latest/tutorial_01_run.html (with a slight tweak to the sample.yaml):

-        gpp: WECANN-1-0/obs4MIPs_ColumbiaU_WECANN-1-0_mon_gpp_gn_v20250902.nc
+        gpp: WECANN-1-0/obs4MIPs_ColumbiaU_WECANN-1-0_mon_gpp_gn_v20260302.nc

Following the ilamb run call, the folder structure looks okay at first glance but the index.html is placed outside the output directory:

├── CanESM5.csv
├── df_reference.csv
├── fetch_model_data.py
├── index.html                                         <---------
├── sample.yaml
└── _tutorial
    ├── EcosystemandCarbonCycle
    │   └── GrossPrimaryProductivity
    │       ├── FLUXNET2015
    │       │   ├── CanESM5.csv
    │       │   ├── CanESM5_nan_rmse.png
    │       │   ├── CanESM5_nan_rmsescore.png
    │       │   ├── CanESM5.nc
    │       │   ├── CanESM5_None_bias.png
    │       │   ├── CanESM5_None_biasscore.png
    │       │   ├── CanESM5_None_mean.png
    │       │   ├── CanESM5_None_trace.png
    │       │   ├── FLUXNET2015.html
    │       │   ├── None_None_taylor.png
    │       │   ├── post.log
    │       │   ├── Reference.nc
    │       │   └── Reference_None_mean.png
    │       └── WECANN-1-0
    │           ├── CanESM5.csv
    │           ├── CanESM5_nan_rmse.png
    │           ├── CanESM5_nan_rmsescore.png
    │           ├── CanESM5.nc
    │           ├── CanESM5_None_bias.png
    │           ├── CanESM5_None_biasscore.png
    │           ├── CanESM5_None_mean.png
    │           ├── CanESM5_None_trace.png
    │           ├── None_None_taylor.png
    │           ├── post.log
    │           ├── Reference.nc
    │           ├── Reference_None_mean.png
    │           └── WECANN-1-0.html
    └── run.yaml

plus, the contents of index.html seem corrupted:

<!doctype html>
<html lang="en">
  <head>
    <meta charset="utf-8">
    <meta name="viewport" content="width=device-width, initial-scale=1">
    <title>Directory of Benchmarking Results</title>
  </head>
  <body>
    <ul>

    </ul>
  </body>
</html>

The strange part is that ilamb run did not produce any noticeable errors so I'm not sure where the problems started. Happy to provide any more info if needed.

Metadata

Metadata

Assignees

No one assigned

    Labels

    bugSomething isn't workingdocumentationImprovements or additions to documentation

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions